RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 KIF5CO60282 957 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 GARSP41250 739 aaKnown RBP12.46□□□□□ -0.41
TRA2B-213ENST00000485530 FNTBP49356 437 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 LIMK1P53667 647 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 GNG11P61952 73 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 SLC20A2Q08357 652 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 SLC10A7Q0GE19 358 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 KLF1Q13351 362 aaPredicted RBP12.46□□□□□ -0.41
TRA2B-213ENST00000485530 HNRNPA1L2Q32P51 320 aaKnown RBP12.46□□□□□ -0.41
TRA2B-213ENST00000485530 FNDC3BQ53EP0 1204 aaKnown RBP12.46□□□□□ -0.41
TRA2B-213ENST00000485530 SERPINA13PQ6UXR4 307 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 ATP11CQ8NB49 1132 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 KDM1BQ8NB78 822 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 UBE2Q2Q8WVN8 375 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 OLFM3Q96PB7 478 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 TSGA13Q96PP4 275 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 FAM129BQ96TA1 746 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 LGMNQ99538 433 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 FAM118BQ9BPY3 351 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 SLC6A17Q9H1V8 727 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 TNKS2Q9H2K2 1166 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 C10orf88Q9H8K7 445 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 DONSONQ9NYP3 566 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 R3HDM2Q9Y2K5 976 aaKnown RBP12.46□□□□□ -0.41
TRA2B-213ENST00000485530 ZKSCAN5Q9Y2L8 839 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 FCF1Q9Y324 198 aaKnown RBP12.46□□□□□ -0.41
TRA2B-213ENST00000485530 CHD5Q8TDI0 1954 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 PKD1L2Q7Z442 2459 aa12.46□□□□□ -0.42
TRA2B-213ENST00000485530 MYO18AQ92614 2054 aaKnown RBP12.46□□□□□ -0.42
TRA2B-213ENST00000485530 ATG13O75143 517 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 SIN3BO75182 1162 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 GJB3O75712 270 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 EPHX1P07099 455 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 ETFBP38117 255 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 RGRP47804 291 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 CXCL12P48061 93 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 PXNP49023 591 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-213ENST00000485530 SERPINH1P50454 418 aaKnown RBP12.45□□□□□ -0.42
TRA2B-213ENST00000485530 COPAP53621 1224 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 IL10RBQ08334 325 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 CAMK2GQ13555 558 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-213ENST00000485530 TFDP2Q14188 446 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 IHHQ14623 411 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 SIX1Q15475 284 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-213ENST00000485530 ACCSLQ4AC99 568 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 HSF5Q4G112 596 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-213ENST00000485530 AASDHQ4L235 1098 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-213ENST00000485530 ODF2Q5BJF6 829 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 RETSATQ6NUM9 610 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 ZNF354CQ86Y25 554 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 PGBD5Q8N414 524 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 OR2A12Q8NGT7 310 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 COG1Q8WTW3 980 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 HAUS1Q96CS2 278 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 MS4A14Q96JA4 679 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 MKRN2Q9H000 416 aaKnown RBP12.45□□□□□ -0.42
TRA2B-213ENST00000485530 PRDM16Q9HAZ2 1276 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 ZMIZ1Q9ULJ6 1067 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 HPCAL4Q9UM19 191 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 MUC22E2RYF6 1773 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-213ENST00000485530 RALGAPA1Q6GYQ0 2036 aa12.45□□□□□ -0.42
TRA2B-213ENST00000485530 CXorf51AA0A1B0GTR3 108 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 TTC24A2A3L6 582 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-213ENST00000485530 GOLGA6L9A6NEM1 432 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 C1QTNF9BB2RNN3 333 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 NPC1O15118 1278 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 ZNF185O15231 689 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 TMCC1O94876 653 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 PAPSS2O95340 614 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-213ENST00000485530 C1QTNF9P0C862 333 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 C7P10643 843 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 HOXB2P14652 356 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 ZFXP17010 805 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-213ENST00000485530 CCNCP24863 283 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 GKP32189 559 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 CNR2P34972 360 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 SERPINB6P35237 376 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 NR2C2P49116 596 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 SF3A2Q15428 464 aaKnown RBP12.44□□□□□ -0.42
TRA2B-213ENST00000485530 INO80DQ53TQ3 878 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-213ENST00000485530 EOGTQ5NDL2 527 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 NYAP1Q6ZVC0 841 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 Q6ZVU0 165 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 ADAT2Q7Z6V5 191 aaKnown RBP12.44□□□□□ -0.42
TRA2B-213ENST00000485530 LONP2Q86WA8 852 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 SLC13A5Q86YT5 568 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-213ENST00000485530 STK40Q8N2I9 435 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 FAM160A2Q8N612 972 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-213ENST00000485530 TSEN2Q8NCE0 465 aaKnown RBP12.44□□□□□ -0.42
TRA2B-213ENST00000485530 CHST14Q8NCH0 376 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 CCDC26Q8TAB7 109 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 ACTL9Q8TC94 416 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-213ENST00000485530 HHIPQ96QV1 700 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 CARD9Q9H257 536 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 RXFP3Q9NSD7 469 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 LHX3Q9UBR4 397 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 EBF1Q9UH73 591 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 SLC25A13Q9UJS0 675 aa12.44□□□□□ -0.42
TRA2B-213ENST00000485530 SARDHQ9UL12 918 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms