RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CCDC89Q8N998 374 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 TSEN2Q8NCE0 465 aaKnown RBP17.86■□□□□ 0.45
CHMP3-207ENST00000485465 CCDC110Q8TBZ0 833 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 SPATA13Q96N96 652 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 ACOX2Q99424 681 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 TMEM245Q9H330 911 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 TBC1D17Q9HA65 648 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 ZDHHC4Q9NPG8 344 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 HAUS2Q9NVX0 235 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 MTF2Q9Y483 593 aaPredicted RBP17.86■□□□□ 0.45
CHMP3-207ENST00000485465 FAM170BA6NMN3 283 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 MUSKO15146 869 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 ZBTB24O43167 697 aaPredicted RBP17.85■□□□□ 0.45
CHMP3-207ENST00000485465 DCXO43602 365 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 OPHN1O60890 802 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 RNF40O75150 1001 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 ETS1P14921 441 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 DR1Q01658 176 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 SIGLEC14Q08ET2 396 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 NSUN2Q08J23 767 aaKnown RBP eCLIP17.85■□□□□ 0.45
CHMP3-207ENST00000485465 ENPP2Q13822 863 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 DHX34Q14147 1143 aaKnown RBP17.85■□□□□ 0.45
CHMP3-207ENST00000485465 LRRC32Q14392 662 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 UBXN2BQ14CS0 331 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 SERPINA13PQ6UXR4 307 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 PRUNE1Q86TP1 453 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 MMGT1Q8N4V1 131 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 GLIS1Q8NBF1 620 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 MGME1Q9BQP7 344 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 FOXQ1Q9C009 403 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 TNKS2Q9H2K2 1166 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 LMAN1LQ9HAT1 526 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 CACNA2D2Q9NY47 1150 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 NEU2Q9Y3R4 380 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 STON1Q9Y6Q2 735 aa17.85■□□□□ 0.45
CHMP3-207ENST00000485465 WASH3PC4AMC7 463 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 GAS8O95995 478 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 GSRP00390 522 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 KRT14P02533 472 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 ZSCAN5DPP0CG00 497 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 HLA-EP13747 358 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 PRKCHP24723 683 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 CD68P34810 354 aaPredicted RBP17.84■□□□□ 0.45
CHMP3-207ENST00000485465 RPL22P35268 128 aaKnown RBP17.84■□□□□ 0.45
CHMP3-207ENST00000485465 RGRP47804 291 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 MAXP61244 160 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 ITKQ08881 620 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 FZD5Q13467 585 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 HNRNPA1L2Q32P51 320 aaKnown RBP17.84■□□□□ 0.45
CHMP3-207ENST00000485465 TRMT11Q7Z4G4 463 aaKnown RBP17.84■□□□□ 0.45
CHMP3-207ENST00000485465 PLPP6Q8IY26 295 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 CHPFQ8IZ52 775 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 SYNPOQ8N3V7 929 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 ZNF366Q8N895 744 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 IL17RCQ8NAC3 791 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 TM6SF2Q9BZW4 377 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 POLR1EQ9GZS1 481 aaKnown RBP17.84■□□□□ 0.45
CHMP3-207ENST00000485465 GLOD4Q9HC38 313 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 PCDH9Q9HC56 1237 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 SUN2Q9UH99 717 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 TTLL3Q9Y4R7 772 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 SHROOM3Q8TF72 1996 aa17.84■□□□□ 0.45
CHMP3-207ENST00000485465 MUC22E2RYF6 1773 aaPredicted RBP17.84■□□□□ 0.45
CHMP3-207ENST00000485465 EDDM13A0A1B0GTR0 161 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 STK25O00506 426 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 TTI1O43156 1089 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 KLF8O95600 359 aaPredicted RBP17.83■□□□□ 0.44
CHMP3-207ENST00000485465 CR2P20023 1033 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 NTSR1P30989 418 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 ACTN2P35609 894 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 WASP42768 502 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 CSNK1DP48730 415 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 SNRPD1P62314 119 aaKnown RBP17.83■□□□□ 0.44
CHMP3-207ENST00000485465 PPP1R7Q15435 360 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 TRIP13Q15645 432 aaPredicted RBP17.83■□□□□ 0.44
CHMP3-207ENST00000485465 KCTD19Q17RG1 926 aaPredicted RBP17.83■□□□□ 0.44
CHMP3-207ENST00000485465 HSF5Q4G112 596 aaPredicted RBP17.83■□□□□ 0.44
CHMP3-207ENST00000485465 CARD16Q5EG05 197 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 ATXN7L2Q5T6C5 722 aaPredicted RBP17.83■□□□□ 0.44
CHMP3-207ENST00000485465 ALG1LQ6GMV1 187 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 ITPRIPL1Q6GPH6 555 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 SDE2Q6IQ49 451 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 C4orf22Q6V702 233 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 ARHGEF18Q6ZSZ5 1173 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 Q6ZVU0 165 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 SYDE1Q6ZW31 735 aaPredicted RBP17.83■□□□□ 0.44
CHMP3-207ENST00000485465 MAATS1Q7Z4T9 603 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 JAMLQ86YT9 394 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 NOA1Q8NC60 698 aaKnown RBP17.83■□□□□ 0.44
CHMP3-207ENST00000485465 OR2AP1Q8NGE2 309 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 RPLP0P6Q8NHW5 317 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 PTPRN2Q92932 1015 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 EXOC2Q96KP1 924 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 GDAP1L1Q96MZ0 367 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 NUDCD1Q96RS6 583 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 OSBPL6Q9BZF3 934 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 SLC25A51Q9H1U9 297 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 GBA3Q9H227 469 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 MTG2Q9H4K7 406 aa17.83■□□□□ 0.44
CHMP3-207ENST00000485465 PAK5Q9P286 719 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms