RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 TISP43B9A030 160 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 NPIPB6E9PJ23 425 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 H0YCG3 227 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 FFAR2O15552 330 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 NOBOXO60393 691 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 CDKL5O76039 1030 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 TBX18O95935 607 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 TMEM253P0C7T8 217 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 CKMT1AP12532 417 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 TGM2P21980 687 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 GUCY2CP25092 1073 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 PGFP49763 221 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 DUSP3P51452 185 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-210ENST00000485247 GALCP54803 685 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 KCNJ12Q14500 433 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 TTC31Q49AM3 519 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-210ENST00000485247 SLC45A4Q5BKX6 768 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 MDH1BQ5I0G3 518 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 LCE1DQ5T752 114 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 FBXW10Q5XX13 1052 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 TMEM215Q68D42 235 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 ADALQ6DHV7 355 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 UNC5AQ6ZN44 842 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 KCNK18Q7Z418 384 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 ANKS1BQ7Z6G8 1248 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 CLEC14AQ86T13 490 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 NUP93Q8N1F7 819 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 CSGALNACT2Q8N6G5 542 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 OR4C6Q8NH72 309 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 SCAMP5Q8TAC9 235 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 SPATA20Q8TB22 786 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 MYCBPAPQ8TBZ2 947 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 MAPK15Q8TD08 544 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 KBTBD7Q8WVZ9 684 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 OVCA2Q8WZ82 227 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 ZNF274Q96GC6 653 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-210ENST00000485247 KCNK16Q96T55 309 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 TIPINQ9BVW5 301 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 ZNF518BQ9C0D4 1074 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 ZNF552Q9H707 407 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-210ENST00000485247 UCKL1Q9NWZ5 548 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 FBXL12Q9NXK8 326 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 GDAP2Q9NXN4 497 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 PRR13Q9NZ81 148 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 ORC3Q9UBD5 711 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-210ENST00000485247 SERGEFQ9UGK8 458 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 LSM7Q9UK45 103 aaKnown RBP5.57□□□□□ -1.52
PTPN4-210ENST00000485247 CLEC4EQ9ULY5 219 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 NCKAP1Q9Y2A7 1128 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 GPR55Q9Y2T6 319 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-210ENST00000485247 PCDHGA8Q9Y5G5 932 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 ENTPD2Q9Y5L3 495 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 CKAP5Q14008 2032 aa5.57□□□□□ -1.52
PTPN4-210ENST00000485247 ZFC3H1O60293 1989 aaKnown RBP5.56□□□□□ -1.52
PTPN4-210ENST00000485247 LRRC72A6NJI9 287 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 PP2D1A8MPX8 630 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 ANKRD63C9JTQ0 380 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 K7ENM7 598 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 CLDN5O00501 218 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 TLR5O60602 858 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 RTN2O75298 545 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 RTN3O95197 1032 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-210ENST00000485247 PENKP01210 267 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-210ENST00000485247 PIGRP01833 764 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 GP1BAP07359 652 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 VAV1P15498 845 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 DGKAP23743 735 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 PSMA5P28066 241 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 SLC5A2P31639 672 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 TUBP50607 506 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 NCKAP1LP55160 1127 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 ZBTB16Q05516 673 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 GOLGA8FQ08AF8 430 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 GOLGA8DPQ0D2H9 430 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 MORC3Q14149 939 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 EIF4HQ15056 248 aaKnown RBP5.56□□□□□ -1.52
PTPN4-210ENST00000485247 E2F5Q15329 346 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 ZRSR1Q15695 479 aaKnown RBP5.56□□□□□ -1.52
PTPN4-210ENST00000485247 FNDC3BQ53EP0 1204 aaKnown RBP5.56□□□□□ -1.52
PTPN4-210ENST00000485247 FBLN7Q53RD9 439 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 MANEAQ5SRI9 462 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 SNX30Q5VWJ9 437 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 ZNF776Q68DI1 518 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-210ENST00000485247 CRTC1Q6UUV9 634 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 C14orf80Q86SX3 495 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 VASH2Q86V25 355 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 JAMLQ86YT9 394 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 TICAM1Q8IUC6 712 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 CCDC83Q8IWF9 413 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 DIS3L2Q8IYB7 885 aaKnown RBP5.56□□□□□ -1.52
PTPN4-210ENST00000485247 LRRC52Q8N7C0 313 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 TMEM52Q8NDY8 209 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 WDR36Q8NI36 951 aaKnown RBP5.56□□□□□ -1.52
PTPN4-210ENST00000485247 IFI44Q8TCB0 444 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 HTR3CQ8WXA8 447 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 GTF3C6Q969F1 213 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 ARRDC3Q96B67 414 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 GRAMD1AQ96CP6 724 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 PIWIL1Q96J94 861 aaKnown RBP5.56□□□□□ -1.52
PTPN4-210ENST00000485247 DHRS1Q96LJ7 313 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms