RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	DHX57	Q6P158	1386 aa	Known RBP	4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	MAP3K5	Q99683	1374 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	ATP10B	O94823	1461 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	DIP2A	Q14689	1571 aa		4.22	□□□□□ -1.73
VPS8-223	ENST00000485024	PDE4DIP	Q5VU43	2346 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	TMEM247	A6NEH6	219 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	TTC36	A6NLP5	189 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	PRSS47	A8MTI9	375 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024		M0QYT0	321 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	GRM8	O00222	908 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	TNPO2	O14787	897 aa	Known RBP	4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	DHX16	O60231	1041 aa	Known RBP	4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	CYP21A2	P08686	494 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	CYP4B1	P13584	511 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	ACP5	P13686	325 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	STAT1	P42224	750 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	CDH15	P55291	814 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	EEFSEC	P57772	596 aa	Known RBP	4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	FAM3B	P58499	235 aa	Predicted RBP	4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	DEUP1	Q05D60	604 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	CDK18	Q07002	472 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	SEMA3A	Q14563	771 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	CCNG2	Q16589	344 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	LRRC24	Q50LG9	513 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	KLHL24	Q6TFL4	600 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	VSTM1	Q6UX27	236 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	DPY19L3	Q6ZPD9	716 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	B4GALNT4	Q76KP1	1039 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	DIS3L2	Q8IYB7	885 aa	Known RBP	4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	LAS2	Q8IYD9	372 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	LSM14A	Q8ND56	463 aa	Known RBP	4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	HS6ST2	Q96MM7	605 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	SDF4	Q9BRK5	362 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	ELOVL1	Q9BW60	279 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	NPL	Q9BXD5	320 aa	Predicted RBP	4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	CLPB	Q9H078	707 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	SYNC	Q9H7C4	482 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	SAP30L	Q9HAJ7	183 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	THAP1	Q9NVV9	213 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	SLC25A13	Q9UJS0	675 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	FZD4	Q9ULV1	537 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	CNPY2	Q9Y2B0	182 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	A2ML1	A8K2U0	1454 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	NEURL4	Q96JN8	1562 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	ABCA10	Q8WWZ4	1543 aa		4.21	□□□□□ -1.74
VPS8-223	ENST00000485024	CYP2D7	A0A087X1C5	515 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024		M0QZQ0	153 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	USP12	O75317	370 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	HLA-DQA2	P01906	255 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	CLEC3B	P05452	202 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	HOXB9	P17482	250 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	ENG	P17813	658 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	GALNS	P34059	522 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	DRG2	P55039	364 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	GPC5	P78333	572 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	ARHGAP8	P85298	464 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	LMAN2	Q12907	356 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	PTP4A2	Q12974	167 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	NAA25	Q14CX7	972 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	DAZAP2	Q15038	168 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	PRICKLE4	Q2TBC4	344 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	SLC45A4	Q5BKX6	768 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	PCID2	Q5JVF3	399 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	FBXL22	Q6P050	247 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	AADACL2	Q6P093	401 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	SLC22A25	Q6T423	547 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	CCDC129	Q6ZRS4	1044 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	GALNT7	Q86SF2	657 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	ADSSL1	Q8N142	457 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	NANOGP1	Q8N7R0	232 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	ANKRD52	Q8NB46	1076 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	REPS1	Q96D71	796 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	EDC3	Q96F86	508 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	HIC2	Q96JB3	615 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	FYTTD1	Q96QD9	318 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	BARD1	Q99728	777 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	TRIM31	Q9BZY9	425 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	ERVK-5	Q9HDB9	667 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	EIF2B3	Q9NR50	452 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	DLL3	Q9NYJ7	618 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	CLIC5	Q9NZA1	410 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	KCND2	Q9NZV8	630 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	MPP6	Q9NZW5	540 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	DKK3	Q9UBP4	350 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	NRBP1	Q9UHY1	535 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	ASAP1	Q9ULH1	1129 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	VPS4A	Q9UN37	437 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	ABCA5	Q8WWZ7	1642 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	SPATA31A5	Q5VU36	1347 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	SPATA31A7	Q8IWB4	1347 aa		4.2	□□□□□ -1.74
VPS8-223	ENST00000485024	ZNF142	P52746	1687 aa	Predicted RBP	4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	ADCY9	O60503	1353 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	C16orf96	A6NNT2	1141 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	TEX22	C9J3V5	150 aa		4.19	□□□□□ -1.74
VPS8-223	ENST00000485024	BTBD19	C9JJ37	291 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms