RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 DCAF16Q9NXF7 216 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 NKX1-2Q9UD57 310 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 OSGIN1Q9UJX0 560 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 RRP15Q9Y3B9 282 aaKnown RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 FPGT-TNNI3KV9GXZ4 949 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 PCSK5Q92824 1860 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 SPAG9O60271 1321 aaKnown RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 ADGRF5Q8IZF2 1346 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 ZNF644Q9H582 1327 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 SYNJ2BP-COX16A0A087WUM0 186 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 CCDC195A0A1B0GUA6 201 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 A0A1W2PRG0 241 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 OR2A25A4D2G3 310 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 KRT87PA6NCN2 255 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 TMEM191CA6NGB0 347 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 C3orf70A6NLC5 250 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 LRRC53A6NM62 1247 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 BTBD18B2RXH4 712 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 M0QYT0 321 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 GRM8O00222 908 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 PER2O15055 1255 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 PGRMC2O15173 223 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 PRPSAP2O60256 369 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 CCNT1O60563 726 aaKnown RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 PAGE4O60829 102 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 KINO60870 393 aaKnown RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 PSMD10O75832 226 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 STAM2O75886 525 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 IPO7O95373 1038 aaKnown RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 ITGB1P05556 798 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 TMEM225BP0DP42 221 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 KCNA2P16389 499 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 KRT4P19013 534 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 IL10P22301 178 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 CD6P30203 668 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 HOXA13P31271 388 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 RFC1P35251 1148 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 PBX1P40424 430 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 RPS6KA3P51812 740 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 ZNF132P52740 706 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 LIMK1P53667 647 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 POLR2FP61218 127 aaKnown RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 HMGN5P82970 282 aaKnown RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 ARHGAP8P85298 464 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 CDK18Q07002 472 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 BFSP2Q13515 415 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 PTK6Q13882 451 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 FRG1Q14331 258 aaKnown RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 GPR162Q16538 588 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 ST3GAL2Q16842 350 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 TOR1AIP1Q5JTV8 583 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 MPP7Q5T2T1 576 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 ARHGAP40Q5TG30 622 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 FAM90A2PQ658T7 463 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 WDR73Q6P4I2 378 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 LINC00696Q6ZRV3 163 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 GPRIN1Q7Z2K8 1008 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 GSPT2Q8IYD1 628 aaKnown RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 SAMD14Q8IZD0 417 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 MINDY1Q8N5J2 469 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 C11orf44Q8N8P7 122 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 SPATA20Q8TB22 786 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 POC1BQ8TC44 478 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 ZFAND2BQ8WV99 257 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 TMEM171Q8WVE6 324 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 RAB40AQ8WXH6 277 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 ST8SIA2Q92186 375 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 MRPS27Q92552 414 aaKnown RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 TMCO6Q96DC7 493 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 LRIG1Q96JA1 1093 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 RPL10LQ96L21 214 aaKnown RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 C1orf74Q96LT6 269 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 DACH2Q96NX9 599 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 WDFY2Q96P53 400 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 DGAT2Q96PD7 388 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 SLC25A23Q9BV35 468 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 CCDC106Q9BWC9 280 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 VN1R3Q9BXE9 311 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 TLR10Q9BXR5 811 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 REXO4Q9GZR2 422 aaKnown RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 CTDSP1Q9GZU7 261 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 TRIM36Q9NQ86 728 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 AKAP7Q9P0M2 348 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 RIMKLBQ9ULI2 386 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 NENFQ9UMX5 172 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.65□□□□□ -1.67
PTCD3-214ENST00000483925 SNX14Q9Y5W7 946 aa4.65□□□□□ -1.67
PTCD3-214ENST00000483925 E7ENX8 843 aa4.64□□□□□ -1.67
PTCD3-214ENST00000483925 AGPSO00116 658 aa4.64□□□□□ -1.67
PTCD3-214ENST00000483925 DNM1LO00429 736 aa4.64□□□□□ -1.67
PTCD3-214ENST00000483925 FOXN1O15353 648 aa4.64□□□□□ -1.67
PTCD3-214ENST00000483925 HOXA3O43365 443 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-214ENST00000483925 CHRM4P08173 479 aa4.64□□□□□ -1.67
PTCD3-214ENST00000483925 SPATA31D3P0C874 917 aa4.64□□□□□ -1.67
PTCD3-214ENST00000483925 GABRB1P18505 474 aa4.64□□□□□ -1.67
PTCD3-214ENST00000483925 CASTP20810 708 aaKnown RBP4.64□□□□□ -1.67
PTCD3-214ENST00000483925 TCEA1P23193 301 aaKnown RBP4.64□□□□□ -1.67
PTCD3-214ENST00000483925 SLC6A2P23975 617 aa4.64□□□□□ -1.67
PTCD3-214ENST00000483925 MGAT1P26572 445 aa4.64□□□□□ -1.67
PTCD3-214ENST00000483925 PIP4K2AP48426 406 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms