RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 ZFP14Q9HCL3 533 aa17.48■□□□□ 0.39
MRPL28-210ENST00000483764 SPHK2Q9NRA0 654 aa17.48■□□□□ 0.39
MRPL28-210ENST00000483764 DUS2Q9NX74 493 aaKnown RBP17.48■□□□□ 0.39
MRPL28-210ENST00000483764 PLK2Q9NYY3 685 aa17.48■□□□□ 0.39
MRPL28-210ENST00000483764 PSMC3IPQ9P2W1 217 aaPredicted RBP17.48■□□□□ 0.39
MRPL28-210ENST00000483764 DOCK4Q8N1I0 1966 aa17.48■□□□□ 0.39
MRPL28-210ENST00000483764 SZT2Q5T011 3432 aa17.48■□□□□ 0.39
MRPL28-210ENST00000483764 A0A0D9SEW6 157 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 FAM47DPA6NHR8 397 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 MATN3O15232 486 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 LAMP2P13473 410 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 ACTN3Q08043 901 aaPredicted RBP17.47■□□□□ 0.39
MRPL28-210ENST00000483764 CDH18Q13634 790 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 FSCBQ5H9T9 825 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 ANKRD20A2Q5SQ80 823 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 FAM182AQ5T1J6 154 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 RNF187Q5TA31 235 aaPredicted RBP17.47■□□□□ 0.39
MRPL28-210ENST00000483764 ANKRD20A1Q5TYW2 823 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 ANKRD20A3Q5VUR7 823 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 RNF219Q5W0B1 726 aaPredicted RBP17.47■□□□□ 0.39
MRPL28-210ENST00000483764 RNF43Q68DV7 783 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 TANGO2Q6ICL3 276 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 ZNF783Q6ZMS7 281 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 RGS9BPQ6ZS82 235 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 Q7L0L9 218 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 MFN1Q8IWA4 741 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 PYROXD1Q8WU10 500 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 SUSD6Q92537 303 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 C9orf72Q96LT7 481 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 RABEP2Q9H5N1 569 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 USP15Q9Y4E8 981 aaPredicted RBP17.47■□□□□ 0.39
MRPL28-210ENST00000483764 A0A0A0MRY4 1105 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 H3BQ06 376 aaPredicted RBP17.47■□□□□ 0.39
MRPL28-210ENST00000483764 SUN1O94901 812 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 PENKP01210 267 aaPredicted RBP17.47■□□□□ 0.39
MRPL28-210ENST00000483764 JCHAINP01591 159 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 VIMP08670 466 aaKnown RBP17.47■□□□□ 0.39
MRPL28-210ENST00000483764 CCNB1P14635 433 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 PTPN3P26045 913 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 STX2P32856 288 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 ETFBP38117 255 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 IFNAR2P48551 515 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 GEMIN4P57678 1058 aaKnown RBP17.47■□□□□ 0.39
MRPL28-210ENST00000483764 PDIA2Q13087 525 aaKnown RBP17.47■□□□□ 0.39
MRPL28-210ENST00000483764 CCDC85BQ15834 202 aaPredicted RBP17.47■□□□□ 0.39
MRPL28-210ENST00000483764 LY6G5CQ5SRR4 150 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 IL31Q6EBC2 164 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 TRABD2AQ86V40 505 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 OR7D4Q8NG98 312 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 FIBINQ8TAL6 211 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 FATE1Q969F0 183 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 LRRC39Q96DD0 335 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 SPATA13Q96N96 652 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 VAT1Q99536 393 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 SPON2Q9BUD6 331 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 BBS2Q9BXC9 721 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 MUC3BQ9H195 1237 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 SP110Q9HB58 689 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 LRRC4CQ9HCJ2 640 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 KCNK9Q9NPC2 374 aa17.47■□□□□ 0.39
MRPL28-210ENST00000483764 THG1LQ9NWX6 298 aaKnown RBP17.47■□□□□ 0.39
MRPL28-210ENST00000483764 CCT8L1PA6NM43 557 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 J3KR12 359 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 OPHN1O60890 802 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 MAGEA6P43360 314 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 IL10RBQ08334 325 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 ANO4Q32M45 955 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 EML3Q32P44 896 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 CCDC38Q502W7 563 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 TEX44Q53QW1 395 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 PID1Q7Z2X4 250 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 ZBED8Q8IZ13 594 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 ZNF567Q8N184 647 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 ST13P5Q8NFI4 369 aaPredicted RBP17.46■□□□□ 0.39
MRPL28-210ENST00000483764 WFDC5Q8TCV5 224 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 CPT1BQ92523 772 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 SMC6Q96SB8 1091 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 ACE2Q9BYF1 805 aaPredicted RBP17.46■□□□□ 0.39
MRPL28-210ENST00000483764 CEP41Q9BYV8 373 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 ACSS3Q9H6R3 686 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 VPS37BQ9H9H4 285 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 ATP13A1Q9HD20 1204 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 MARK1Q9P0L2 795 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 TRHDEQ9UKU6 1024 aa17.46■□□□□ 0.39
MRPL28-210ENST00000483764 NEDD8-MDP1E9PL57 170 aa17.45■□□□□ 0.38
MRPL28-210ENST00000483764 H0YHG0 523 aa17.45■□□□□ 0.38
MRPL28-210ENST00000483764 KDELR3O43731 214 aa17.45■□□□□ 0.38
MRPL28-210ENST00000483764 PRAMEF11O60813 436 aa17.45■□□□□ 0.38
MRPL28-210ENST00000483764 PEX11BO96011 259 aa17.45■□□□□ 0.38
MRPL28-210ENST00000483764 OXCT1P55809 520 aa17.45■□□□□ 0.38
MRPL28-210ENST00000483764 ZBTB17Q13105 803 aa17.45■□□□□ 0.38
MRPL28-210ENST00000483764 HNRNPDQ14103 355 aaKnown RBP17.45■□□□□ 0.38
MRPL28-210ENST00000483764 SPARCL1Q14515 664 aa17.45■□□□□ 0.38
MRPL28-210ENST00000483764 DHCR24Q15392 516 aa17.45■□□□□ 0.38
MRPL28-210ENST00000483764 SKIV2LQ15477 1246 aaKnown RBP17.45■□□□□ 0.38
MRPL28-210ENST00000483764 VITQ6UXI7 678 aa17.45■□□□□ 0.38
MRPL28-210ENST00000483764 MFSD6LQ8IWD5 586 aa17.45■□□□□ 0.38
MRPL28-210ENST00000483764 TAB3Q8N5C8 712 aaPredicted RBP17.45■□□□□ 0.38
MRPL28-210ENST00000483764 IL12RB2Q99665 862 aa17.45■□□□□ 0.38
MRPL28-210ENST00000483764 FEM1AQ9BSK4 669 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms