RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 PAPOLAP51003 745 aaKnown RBP9.81□□□□□ -0.84
HMG20B-210ENST00000483417 PLK1P53350 603 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 SHC2P98077 582 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 GNA12Q03113 381 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 ZBTB16Q05516 673 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 PDK2Q15119 407 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 PLEKHG6Q3KR16 790 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 ZFYVE27Q5T4F4 411 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 AFMIDQ63HM1 303 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 KAZNQ674X7 775 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 PSAPL1Q6NUJ1 521 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 LINGO4Q6UY18 593 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 SPOCD1Q6ZMY3 1216 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 PIP4P1Q86T03 277 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 RCOR2Q8IZ40 523 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 SLC35F6Q8N357 371 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 KDM1BQ8NB78 822 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 FOXJ1Q92949 421 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 ARHGEF2Q92974 986 aaKnown RBP9.81□□□□□ -0.84
HMG20B-210ENST00000483417 FAF2Q96CS3 445 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 HMCESQ96FZ2 354 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 CNTNAP3BQ96NU0 1288 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 EPAS1Q99814 870 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 TLR10Q9BXR5 811 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 CALN1Q9BXU9 219 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 ACE2Q9BYF1 805 aaPredicted RBP9.81□□□□□ -0.84
HMG20B-210ENST00000483417 CNTNAP3Q9BZ76 1288 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 TSGA10Q9BZW7 698 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 RSPH9Q9H1X1 276 aaPredicted RBP9.81□□□□□ -0.84
HMG20B-210ENST00000483417 LRRC19Q9H756 370 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 SUN2Q9UH99 717 aa9.81□□□□□ -0.84
HMG20B-210ENST00000483417 ILVBLA1L0T0 632 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 RASA4BC9J798 803 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 H3BRJ5 948 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 RNF103O00237 685 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 ZSCAN12O43309 604 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 RASA4O43374 803 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 SMAD6O43541 496 aaKnown RBP9.8□□□□□ -0.84
HMG20B-210ENST00000483417 ASLP04424 464 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 CFIP05156 583 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 CD59P13987 128 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 VAV1P15498 845 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 ACSL1P33121 698 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 MAPK8P45983 427 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 NOVA1P51513 510 aaKnown RBP9.8□□□□□ -0.84
HMG20B-210ENST00000483417 BNC1Q01954 994 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 GBE1Q04446 702 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 MTA1Q13330 715 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 CDH18Q13634 790 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 POLD3Q15054 466 aaPredicted RBP9.8□□□□□ -0.84
HMG20B-210ENST00000483417 KCTD19Q17RG1 926 aaPredicted RBP9.8□□□□□ -0.84
HMG20B-210ENST00000483417 HNRNPA1L2Q32P51 320 aaKnown RBP9.8□□□□□ -0.84
HMG20B-210ENST00000483417 FNDC3BQ53EP0 1204 aaKnown RBP9.8□□□□□ -0.84
HMG20B-210ENST00000483417 WDR45BQ5MNZ6 344 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 SYCP2LQ5T4T6 812 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 C9orf64Q5T6V5 341 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 NCBP2-AS2Q69YL0 99 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 RABEPKQ7Z6M1 372 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 SETD3Q86TU7 594 aaPredicted RBP9.8□□□□□ -0.84
HMG20B-210ENST00000483417 KATNAL2Q8IYT4 538 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 UMODL1-AS1Q8N2C9 162 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 PLD5Q8N7P1 536 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 CALR3Q96L12 384 aaKnown RBP9.8□□□□□ -0.84
HMG20B-210ENST00000483417 WDR24Q96S15 920 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 FAM129BQ96TA1 746 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 ORAI3Q9BRQ5 295 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 PCED1AQ9H1Q7 454 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 C10orf88Q9H8K7 445 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 FBRSQ9HAH7 460 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 DNAAF2Q9NVR5 837 aaKnown RBP9.8□□□□□ -0.84
HMG20B-210ENST00000483417 LCMT1Q9UIC8 334 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 ERVW-1Q9UQF0 538 aa9.8□□□□□ -0.84
HMG20B-210ENST00000483417 A0A1B0GTW7 788 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 TARSL2A2RTX5 802 aaKnown RBP9.79□□□□□ -0.84
HMG20B-210ENST00000483417 TTC34A8MYJ7 566 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 CBX4O00257 560 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 PSTPIP1O43586 416 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 KDELR3O43731 214 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 SIN3BO75182 1162 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 ZNF821O75541 412 aaPredicted RBP9.79□□□□□ -0.84
HMG20B-210ENST00000483417 ATP1A1P05023 1023 aaKnown RBP9.79□□□□□ -0.84
HMG20B-210ENST00000483417 SRPRAP08240 638 aaKnown RBP9.79□□□□□ -0.84
HMG20B-210ENST00000483417 CXCR5P32302 372 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 ARL4AP40617 200 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 MAPKAPK2P49137 400 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 VASPP50552 380 aaPredicted RBP9.79□□□□□ -0.84
HMG20B-210ENST00000483417 DYNLT1P63172 113 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 ARF5P84085 180 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 SERINC3Q13530 473 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 SLC12A1Q13621 1099 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 PAFAH1B3Q15102 231 aaKnown RBP9.79□□□□□ -0.84
HMG20B-210ENST00000483417 RPS6KA1Q15418 735 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 CYTH1Q15438 398 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 IFI16Q16666 785 aaKnown RBP9.79□□□□□ -0.84
HMG20B-210ENST00000483417 UAP1L1Q3KQV9 507 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 C6orf118Q5T5N4 469 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 ACBD5Q5T8D3 534 aaPredicted RBP9.79□□□□□ -0.84
HMG20B-210ENST00000483417 TTC39BQ5VTQ0 682 aaPredicted RBP9.79□□□□□ -0.84
HMG20B-210ENST00000483417 RFX6Q8HWS3 928 aa9.79□□□□□ -0.84
HMG20B-210ENST00000483417 RGL4Q8IZJ4 473 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms