RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 MATN3O15232 486 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 NEBLO76041 1014 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 RBP3P10745 1247 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 CASQ1P31415 396 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 GKP32189 559 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 MMP13P45452 471 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 RGRP47804 291 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 CCNHP51946 323 aaPredicted RBP18.12■□□□□ 0.49
CPNE1-224ENST00000483359 COPAP53621 1224 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 ZBTB17Q13105 803 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 POM121L1PQ3SYA9 428 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 OR2AP1Q8NGE2 309 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 CASKIN2Q8WXE0 1202 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 CAPZA3Q96KX2 299 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 ZNF599Q96NL3 588 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 TSGA13Q96PP4 275 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 TPSD1Q9BZJ3 242 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 NT5MQ9NPB1 228 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 CACNA1IQ9P0X4 2223 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 USP34Q70CQ2 3546 aa18.12■□□□□ 0.49
CPNE1-224ENST00000483359 CXorf51AA0A1B0GTR3 108 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 TARSL2A2RTX5 802 aaKnown RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 CCNB1P14635 433 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 GABRG2P18507 467 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 NDUFV2P19404 249 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 DEKP35659 375 aaKnown RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 CSTF1Q05048 431 aaKnown RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 ELAVL3Q14576 367 aaKnown RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 RFTN1Q14699 578 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 PRKD1Q15139 912 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 METTL3Q86U44 580 aaKnown RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 MMAAQ8IVH4 418 aaKnown RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 TTC13Q8NBP0 860 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 OR2T3Q8NH03 318 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 C1orf54Q8WWF1 131 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 CCDC114Q96M63 670 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 QKIQ96PU8 341 aaKnown RBP eCLIP18.11■□□□□ 0.496e-7■■■□□ 15.2
CPNE1-224ENST00000483359 ZDHHC6Q9H6R6 413 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 PRMT8Q9NR22 394 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 HECAQ9UBI9 543 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 SEPT3Q9UH03 358 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 K7ESF4 209 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 JCHAINP01591 159 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 RBL1P28749 1068 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 PSMD8P48556 350 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 SNRPD1P62314 119 aaKnown RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 ITKQ08881 620 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 DMWDQ09019 674 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 SLC45A4Q5BKX6 768 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 CARD16Q5EG05 197 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 PAPD7Q5XG87 772 aaKnown RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 KIAA1324Q6UXG2 1013 aaKnown RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 ZSCAN30Q86W11 494 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 TMPRSS6Q8IU80 811 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 MAML2Q8IZL2 1156 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 PGBD5Q8N414 524 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 OR8D1Q8WZ84 308 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 GDAP1L1Q96MZ0 367 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 RBM22Q9NW64 420 aaKnown RBP eCLIP18.11■□□□□ 0.499e-7■■□□□ 12.8
CPNE1-224ENST00000483359 EVLQ9UI08 416 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-224ENST00000483359 SAR1BQ9Y6B6 198 aa18.11■□□□□ 0.49
CPNE1-224ENST00000483359 KRIT1O00522 736 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 APBB3O95704 486 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 IGSF6O95976 241 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 IL1BP01584 269 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 CTSLP07711 333 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 TCP1P17987 556 aaKnown RBP18.1■□□□□ 0.49
CPNE1-224ENST00000483359 RENBPP51606 427 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 NRLP54845 237 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 SNX1Q13596 522 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 HNRNPDQ14103 355 aaKnown RBP18.1■□□□□ 0.49
CPNE1-224ENST00000483359 DARS2Q6PI48 645 aaKnown RBP18.1■□□□□ 0.49
CPNE1-224ENST00000483359 BBS5Q8N3I7 341 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 RASGEF1CQ8N431 466 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 MAML1Q92585 1016 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 ZNF592Q92610 1267 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 ISG20Q96AZ6 181 aaKnown RBP18.1■□□□□ 0.49
CPNE1-224ENST00000483359 MRGPRX1Q96LB2 322 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 PSKH2Q96QS6 385 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 CD93Q9NPY3 652 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 DNPEPQ9ULA0 475 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 RNF103O00237 685 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 PGRMC1O00264 195 aaKnown RBP18.1■□□□□ 0.49
CPNE1-224ENST00000483359 INSIG1O15503 277 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 ZBTB24O43167 697 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-224ENST00000483359 ALDH1A2O94788 518 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 GSRP00390 522 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 HLA-DQB2P05538 268 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 SCNN1BP51168 640 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 METAP1P53582 386 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 XRCC4Q13426 336 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 ANGPT1Q15389 498 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 SIX1Q15475 284 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-224ENST00000483359 HTR3CQ8WXA8 447 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 AGAP3Q96P47 875 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 FAM129BQ96TA1 746 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 AP1M1Q9BXS5 423 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 BRD8Q9H0E9 1235 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 IL36AQ9UHA7 158 aa18.1■□□□□ 0.49
CPNE1-224ENST00000483359 SARDHQ9UL12 918 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms