RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 TBC1D3DA0A087WVF3 549 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 TBC1D3IA0A087WXS9 549 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 TBC1D3EA0A087X179 549 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 TBC1D3KA0A087X1G2 549 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 TBC1D3FA6NER0 549 aaPredicted RBP18.71■□□□□ 0.59
SMIM4-204ENST00000482728 TBC1D3LB9A6J9 549 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 TMCC1O94876 653 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 TBC1D3HP0C7X1 549 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 NOP2P46087 812 aaKnown RBP18.71■□□□□ 0.59
SMIM4-204ENST00000482728 CCNHP51946 323 aaPredicted RBP18.71■□□□□ 0.59
SMIM4-204ENST00000482728 CNTN1Q12860 1018 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 RSPO4Q2I0M5 234 aaPredicted RBP18.71■□□□□ 0.59
SMIM4-204ENST00000482728 PEAR1Q5VY43 1037 aaPredicted RBP18.71■□□□□ 0.59
SMIM4-204ENST00000482728 TBC1D3GQ6DHY5 549 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 TBC1D3CQ6IPX1 549 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 SLC23A3Q6PIS1 610 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 NCEH1Q6PIU2 408 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 TMCO3Q6UWJ1 677 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 MAP7D3Q8IWC1 876 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 TBC1D3Q8IZP1 549 aaPredicted RBP18.71■□□□□ 0.59
SMIM4-204ENST00000482728 NETO1Q8TDF5 533 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 PPP1R16AQ96I34 528 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 CSPG4P5Q96PW8 444 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 CALN1Q9BXU9 219 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 UBA2Q9UBT2 640 aaPredicted RBP18.71■□□□□ 0.59
SMIM4-204ENST00000482728 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.71■□□□□ 0.59
SMIM4-204ENST00000482728 PCDHA13Q9Y5I0 950 aa18.71■□□□□ 0.59
SMIM4-204ENST00000482728 GOLGA6L6A8MZA4 724 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 PLK4O00444 970 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 KRIT1O00522 736 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 SLC7A4O43246 635 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 GDF9O60383 454 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 LEFTY1O75610 366 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 MTA2O94776 668 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 LCA5LO95447 670 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 POP4O95707 220 aaKnown RBP18.7■□□□□ 0.58
SMIM4-204ENST00000482728 GSRP00390 522 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 CTSLP07711 333 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 SERPINF2P08697 491 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 CDC25BP30305 580 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 DRD3P35462 400 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 METAP1P53582 386 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 TAS2R40P59535 323 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 RHOAP61586 193 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 RAD51Q06609 339 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 PDK2Q15119 407 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 MYLK3Q32MK0 819 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 ATP13A4Q4VNC1 1196 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 KIAA0895LQ68EN5 471 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 CPNE8Q86YQ8 564 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 SPC24Q8NBT2 197 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 OR2AP1Q8NGE2 309 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 BIRC7Q96CA5 298 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 ZDHHC6Q9H6R6 413 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 SP110Q9HB58 689 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 RCOR3Q9P2K3 495 aaPredicted RBP18.7■□□□□ 0.58
SMIM4-204ENST00000482728 IMPACTQ9P2X3 320 aa18.7■□□□□ 0.58
SMIM4-204ENST00000482728 A0A1B0GTW7 788 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 LNP1A1A4G5 178 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 J3KR12 359 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 BCAT2O15382 392 aaPredicted RBP18.69■□□□□ 0.58
SMIM4-204ENST00000482728 PRAMEF11O60813 436 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 ID4P47928 161 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 ATXN3P54252 364 aaPredicted RBP18.69■□□□□ 0.58
SMIM4-204ENST00000482728 ADPRHP54922 357 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 TCEAL1Q15170 157 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 AFMIDQ63HM1 303 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 ZCCHC9Q8N567 271 aaKnown RBP18.69■□□□□ 0.58
SMIM4-204ENST00000482728 LRIG1Q96JA1 1093 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 GDAP1L1Q96MZ0 367 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 EDEM2Q9BV94 578 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 KDM4CQ9H3R0 1056 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 RXFP3Q9NSD7 469 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 WASF2Q9Y6W5 498 aa18.69■□□□□ 0.58
SMIM4-204ENST00000482728 CACNA1EQ15878 2313 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 SOWAHDA6NJG2 315 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 PALMO75781 387 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 NDUFA10O95299 355 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 IGSF6O95976 241 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 SYPP08247 313 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 CD27P26842 260 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 SERPINB6P35237 376 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 CCR5P51681 352 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 MMRN1Q13201 1228 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 ODF2Q5BJF6 829 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 ATXN7L2Q5T6C5 722 aaPredicted RBP18.68■□□□□ 0.58
SMIM4-204ENST00000482728 STPG1Q5TH74 334 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 ARHGAP12Q8IWW6 846 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 NPWQ8N729 165 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 NETO2Q8NC67 525 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 OR6K2Q8NGY2 324 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 TSC1Q92574 1164 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 RMDN1Q96DB5 314 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 BAG1Q99933 345 aaPredicted RBP18.68■□□□□ 0.58
SMIM4-204ENST00000482728 ETNK2Q9NVF9 386 aa18.68■□□□□ 0.58
SMIM4-204ENST00000482728 IPO11Q9UI26 975 aaKnown RBP18.68■□□□□ 0.58
SMIM4-204ENST00000482728 TPX2Q9ULW0 747 aaKnown RBP18.68■□□□□ 0.58
SMIM4-204ENST00000482728 TNRC6BQ9UPQ9 1833 aaKnown RBP18.67■□□□□ 0.58
SMIM4-204ENST00000482728 CNOT1A5YKK6 2376 aaKnown RBP18.67■□□□□ 0.58
SMIM4-204ENST00000482728 PLRG1O43660 514 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms