RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 NRBP2Q9NSY0 501 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 HAUS2Q9NVX0 235 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 TRIP11Q15643 1979 aa6.93□□□□□ -1.3
CLK1-212ENST00000482590 MYH15Q9Y2K3 1946 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 MYH11P35749 1972 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 A0A088AWK7 358 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 A0A1W2PPC4 97 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 TMEM221A6NGB7 291 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 LOC730098B7Z3J9 87 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 M0R296 226 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 GPR32O75388 356 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 TMEM63AO94886 807 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 CPA1P15085 419 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 SLC9A1P19634 815 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 IL11P20809 199 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 SFPQP23246 707 aaKnown RBP eCLIP6.92□□□□□ -1.3
CLK1-212ENST00000482590 EEF1GP26641 437 aaKnown RBP6.92□□□□□ -1.3
CLK1-212ENST00000482590 CIITAP33076 1130 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 PBX3P40426 434 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 GPC3P51654 580 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 SIGLEC14Q08ET2 396 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 ZNF174Q15697 407 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 GRAMD4Q6IC98 578 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 TANGO2Q6ICL3 276 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 FSTL4Q6MZW2 842 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 ANKRD54Q6NXT1 300 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 MIER3Q7Z3K6 550 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 BMP8AQ7Z5Y6 402 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 MRGPRGQ86SM5 289 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 ECHDC2Q86YB7 292 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 NAT8LQ8N9F0 302 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 ASB15Q8WXK1 588 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 ZNF668Q96K58 619 aaPredicted RBP6.92□□□□□ -1.3
CLK1-212ENST00000482590 ELF4Q99607 663 aaPredicted RBP6.92□□□□□ -1.3
CLK1-212ENST00000482590 SLC2A4RGQ9NR83 387 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 VPS54Q9P1Q0 977 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 ZNF711Q9Y462 761 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 DMRT1Q9Y5R6 373 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 DOCK8Q8NF50 2099 aa6.92□□□□□ -1.3
CLK1-212ENST00000482590 CACNA1HO95180 2353 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 H0Y3Z8 333 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 MSH4O15457 936 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 ZC3H11AO75152 810 aaKnown RBP eCLIP6.91□□□□□ -1.3
CLK1-212ENST00000482590 FSBPO95073 299 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 RTN3O95197 1032 aaPredicted RBP6.91□□□□□ -1.3
CLK1-212ENST00000482590 IFNAR1P17181 557 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 DESP17661 470 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 SP100P23497 879 aaPredicted RBP6.91□□□□□ -1.3
CLK1-212ENST00000482590 CTSSP25774 331 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 PSMA5P28066 241 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 HSPA4P34932 840 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 POLD2P49005 469 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 SLC16A1P53985 500 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 CASP6P55212 293 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 HSD17B7P56937 341 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 UBASH3AP57075 661 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 NLRP5P59047 1200 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 PTK2BQ14289 1009 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 UGCGQ16739 394 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 TWF2Q6IBS0 349 aaKnown RBP6.91□□□□□ -1.3
CLK1-212ENST00000482590 CES5AQ6NT32 575 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 Q6ZPA2 131 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 CCDC73Q6ZRK6 1079 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 EPHX4Q8IUS5 362 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 NOSTRINQ8IVI9 506 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 BCL6BQ8N143 479 aaPredicted RBP6.91□□□□□ -1.3
CLK1-212ENST00000482590 CISD2Q8N5K1 135 aaKnown RBP6.91□□□□□ -1.3
CLK1-212ENST00000482590 LINC01465Q8N7H1 131 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 VN1R2Q8NFZ6 395 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 RDM1Q8NG50 284 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 LILRB1Q8NHL6 650 aaPredicted RBP6.91□□□□□ -1.3
CLK1-212ENST00000482590 RIN2Q8WYP3 895 aaPredicted RBP6.91□□□□□ -1.3
CLK1-212ENST00000482590 SUSD6Q92537 303 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 ZNF566Q969W8 418 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 LENG9Q96B70 501 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 NECTIN4Q96NY8 510 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 CASD1Q96PB1 797 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 RIT2Q99578 217 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 GPATCH1Q9BRR8 931 aaKnown RBP6.91□□□□□ -1.3
CLK1-212ENST00000482590 GCOM2Q9BZD3 368 aaPredicted RBP6.91□□□□□ -1.3
CLK1-212ENST00000482590 QRSL1Q9H0R6 528 aaKnown RBP6.91□□□□□ -1.3
CLK1-212ENST00000482590 C2orf40Q9H1Z8 148 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 ZMAT4Q9H898 229 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 PARPBPQ9NWS1 579 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 SPG21Q9NZD8 308 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 BLOC1S6Q9UL45 172 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 SLC39A10Q9ULF5 831 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 PIN4Q9Y237 131 aaKnown RBP6.91□□□□□ -1.3
CLK1-212ENST00000482590 REXO2Q9Y3B8 237 aaKnown RBP6.91□□□□□ -1.3
CLK1-212ENST00000482590 SNX14Q9Y5W7 946 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 USP34Q70CQ2 3546 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 CITO14578 2027 aa6.91□□□□□ -1.3
CLK1-212ENST00000482590 A0A0U1RQF3 1178 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 HIDE1A8MVS5 230 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 TRIM38O00635 465 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 REC8O95072 547 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 DEXIO95424 95 aa6.9□□□□□ -1.3
CLK1-212ENST00000482590 DARSP14868 501 aaKnown RBP6.9□□□□□ -1.3
CLK1-212ENST00000482590 HOXB8P17481 243 aaPredicted RBP6.9□□□□□ -1.3
CLK1-212ENST00000482590 KRT4P19013 534 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms