RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, human

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAIP-208	ENST00000482582	C1orf54	Q8WWF1	131 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	ATG4A	Q8WYN0	398 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	VOPP1	Q96AW1	172 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	CNTNAP3B	Q96NU0	1288 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	CNTNAP3	Q9BZ76	1288 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	PRSS16	Q9NQE7	514 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	LHX3	Q9UBR4	397 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	CXorf51A	A0A1B0GTR3	108 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	TTC24	A2A3L6	582 aa	Predicted RBP	11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	KCNK1	O00180	336 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	RNF103	O00237	685 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	MATN3	O15232	486 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	GJB3	O75712	270 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	HOXB2	P14652	356 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	PRLR	P16471	622 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	CASQ1	P31415	396 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	CLCN6	P51797	869 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	NRL	P54845	237 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	EIF3E	P60228	445 aa	Known RBP	11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	AP1B1	Q10567	949 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	ZBTB17	Q13105	803 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	CAMK2G	Q13555	558 aa	Predicted RBP	11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	LBR	Q14739	615 aa	Known RBP	11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	CRY1	Q16526	586 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	LONRF2	Q1L5Z9	754 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	HSF5	Q4G112	596 aa	Predicted RBP	11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	INO80D	Q53TQ3	878 aa	Predicted RBP	11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	EOGT	Q5NDL2	527 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	TMCO4	Q5TGY1	634 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	SYT13	Q7L8C5	426 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	TRMT11	Q7Z4G4	463 aa	Known RBP	11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	CREG2	Q8IUH2	290 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	CCDC13	Q8IYE1	715 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	STK40	Q8N2I9	435 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	PGBD5	Q8N414	524 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	TSEN2	Q8NCE0	465 aa	Known RBP	11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	CHST14	Q8NCH0	376 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	OR2A12	Q8NGT7	310 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	CCDC26	Q8TAB7	109 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	SLC35B2	Q8TB61	432 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	MAML1	Q92585	1016 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	NSMCE3	Q96MG7	304 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	ZNF599	Q96NL3	588 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	FAM129B	Q96TA1	746 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	CEP41	Q9BYV8	373 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	TM6SF2	Q9BZW4	377 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	SLC6A17	Q9H1V8	727 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	DLL3	Q9NYJ7	618 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	SUN2	Q9UH99	717 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	DNPEP	Q9ULA0	475 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	SAR1B	Q9Y6B6	198 aa		11.98	□□□□□ -0.49
TRAIP-208	ENST00000482582	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	GON4L	Q3T8J9	2241 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	EDDM13	A0A1B0GTR0	161 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582		H7C0C1	242 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	PDE2A	O00408	941 aa	Predicted RBP	11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	CES2	O00748	559 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	PPP1R12A	O14974	1030 aa	Predicted RBP	11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	INSIG1	O15503	277 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	BNIP3L	O60238	219 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	ATG13	O75143	517 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	JCHAIN	P01591	159 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	RBP3	P10745	1247 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	CCNB1	P14635	433 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	TCP1	P17987	556 aa	Known RBP	11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	TGM1	P22735	817 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	RBL1	P28749	1068 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	GK	P32189	559 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	NNMT	P40261	264 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	MAGEA9	P43362	315 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	ATP5O	P48047	213 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	COPA	P53621	1224 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	GEMIN4	P57678	1058 aa	Known RBP	11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	CSTF1	Q05048	431 aa	Known RBP	11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	WASHC5	Q12768	1159 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	XRCC4	Q13426	336 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	IHH	Q14623	411 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	SLC45A4	Q5BKX6	768 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	SDE2	Q6IQ49	451 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	MAMSTR	Q6ZN01	415 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	DPY19L3	Q6ZPD9	716 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	BZW1	Q7L1Q6	419 aa	Known RBP	11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	TEX26	Q8N6G2	289 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	CNTD1	Q8N815	330 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	PRELID2	Q8N945	189 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	ACTRT1	Q8TDG2	376 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	TFB1M	Q8WVM0	346 aa	Known RBP	11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	CASKIN2	Q8WXE0	1202 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	FATE1	Q969F0	183 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	ISG20	Q96AZ6	181 aa	Known RBP	11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	EXOC2	Q96KP1	924 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	CAPZA3	Q96KX2	299 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	HHIP	Q96QV1	700 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	IL12RB2	Q99665	862 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	HINFP	Q9BQA5	517 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	AP1M1	Q9BXS5	423 aa		11.97	□□□□□ -0.49
TRAIP-208	ENST00000482582	CEP44	Q9C0F1	390 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms