RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 RBBP8Q99708 897 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 MIPEPQ99797 713 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 EFCAB1Q9HAE3 211 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 EML4Q9HC35 981 aaKnown RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 GLOD4Q9HC38 313 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 NDFIP2Q9NV92 336 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 MARCH2Q9P0N8 246 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 RCOR3Q9P2K3 495 aaPredicted RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 PTCH2Q9Y6C5 1203 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 AK5Q9Y6K8 562 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 MYADML2A6NDP7 307 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 MANSC4A6NHS7 340 aaPredicted RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 COX4I1P13073 169 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 ANPEPP15144 967 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 ACADSP16219 412 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 LIMK2P53671 638 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 CACNA2D1P54289 1103 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 PCBP1Q15365 356 aaKnown RBP eCLIP9.27□□□□□ -0.93
CALD1-220ENST00000482470 RARS2Q5T160 578 aaKnown RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 LDLRAD1Q5T700 205 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 FRA10AC1Q70Z53 315 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 TRIM74Q86UV6 250 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 TRIM73Q86UV7 250 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 TSPAN17Q96FV3 270 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 CNBD2Q96M20 576 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 LENG8Q96PV6 779 aaPredicted RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 GCNAQ96QF7 691 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 ZNF184Q99676 751 aaPredicted RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 AGO3Q9H9G7 860 aaKnown RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 DSEQ9UL01 958 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 ZNF831Q5JPB2 1677 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 TYW5A2RUC4 315 aaKnown RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 PTGESO14684 152 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 ADCY6O43306 1168 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 YWHAQP27348 245 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 CDK7P50613 346 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 KCNA10Q16322 511 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 RBBP7Q16576 425 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 NFE2Q16621 373 aaPredicted RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 MARK2Q7KZI7 788 aaKnown RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 LCA5Q86VQ0 697 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 FBXO27Q8NI29 283 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 MAGEC3Q8TD91 643 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 GDPD5Q8WTR4 605 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 UTP4Q969X6 686 aaKnown RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 RCN3Q96D15 328 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 TEKT5Q96M29 485 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 ZNF570Q96NI8 536 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 SERPINB11Q96P15 392 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 EGFL8Q99944 293 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 EFHD1Q9BUP0 239 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 SLC39A8Q9C0K1 460 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 RGS18Q9NS28 235 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 GDAP2Q9NXN4 497 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 HACD3Q9P035 362 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 SLC2A6Q9UGQ3 507 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 LRCH1Q9Y2L9 728 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 GIT1Q9Y2X7 761 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 A8MX80 341 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 HDAC3O15379 428 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 SNUPNO95149 360 aaKnown RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 CHEK2O96017 543 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 IDH3AP50213 366 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 IL1RL1Q01638 556 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 TUSC3Q13454 348 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 PTK2BQ14289 1009 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 FUT11Q495W5 492 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 ZNF280DQ6N043 979 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 DCLRE1AQ6PJP8 1040 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 RPS27LQ71UM5 84 aaKnown RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 LGI2Q8N0V4 545 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 TRIML2Q8N7C3 387 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 KHSRPQ92945 711 aaKnown RBP eCLIP9.26□□□□□ -0.933e-7■■■□□ 14.6
CALD1-220ENST00000482470 SEMA3CQ99985 751 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 OXCT2Q9BYC2 517 aaPredicted RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 GBA3Q9H227 469 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 MTMR10Q9NXD2 777 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 UXTQ9UBK9 157 aaPredicted RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 SLC7A8Q9UHI5 535 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 DTNAQ9Y4J8 743 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 PCDHB5Q9Y5E4 795 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 C9JVG2 144 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 AKAP10O43572 662 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 SLC2A3P11169 496 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 PRKAR2AP13861 404 aaKnown RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 KCNE1P15382 129 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 ITGB6P18564 788 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 DNAJB2P25686 324 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 HARS2P49590 506 aaKnown RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 SERPINH1P50454 418 aaKnown RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 GALNT3Q14435 633 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 SGO1Q5FBB7 561 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 INTS6LQ5JSJ4 861 aaKnown RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 SCIMPQ6UWF3 145 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 C16orf59Q7L2K0 433 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 ARMCX6Q7L4S7 300 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 DEFB128Q7Z7B8 93 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 IFNLR1Q8IU57 520 aaPredicted RBP9.26□□□□□ -0.93
CALD1-220ENST00000482470 NPWQ8N729 165 aa9.26□□□□□ -0.93
CALD1-220ENST00000482470 FAM156AQ8NDB6 213 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms