RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 GIPC1O14908 333 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 DAPK3O43293 454 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 RASA4O43374 803 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 BUB1O43683 1085 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 LEFTY1O75610 366 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 GSRP00390 522 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 ITGB7P26010 798 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 PCK1P35558 622 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 ZNF135P52742 658 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-213ENST00000482192 C21orf59P57076 290 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 TAS2R38P59533 333 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 SNRPD1P62314 119 aaKnown RBP12.1□□□□□ -0.47
HMGN1-213ENST00000482192 HNRNPDQ14103 355 aaKnown RBP12.1□□□□□ -0.47
HMGN1-213ENST00000482192 PIGHQ14442 188 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-213ENST00000482192 CA9Q16790 459 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 SETMARQ53H47 684 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-213ENST00000482192 SLC45A4Q5BKX6 768 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 NAPEPLDQ6IQ20 393 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 NEK5Q6P3R8 708 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 ALKBH5Q6P6C2 394 aaKnown RBP12.1□□□□□ -0.47
HMGN1-213ENST00000482192 LAYNQ6UX15 382 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 LEKR1Q6ZMV7 388 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 RFX8Q6ZV50 586 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 ERN2Q76MJ5 926 aaKnown RBP12.1□□□□□ -0.47
HMGN1-213ENST00000482192 PRPF39Q86UA1 669 aaKnown RBP12.1□□□□□ -0.47
HMGN1-213ENST00000482192 RYBPQ8N488 228 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-213ENST00000482192 RNF214Q8ND24 703 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 OR2AP1Q8NGE2 309 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 ARRDC3Q96B67 414 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 HMCESQ96FZ2 354 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 SERAC1Q96JX3 654 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 TM6SF2Q9BZW4 377 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 ZDHHC6Q9H6R6 413 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 EBF2Q9HAK2 575 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 IL21RQ9HBE5 538 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 AASDHPPTQ9NRN7 309 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 TM7SF3Q9NS93 570 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 HECAQ9UBI9 543 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-213ENST00000482192 DMTF1Q9Y222 760 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 FNDC3AQ9Y2H6 1198 aaKnown RBP12.1□□□□□ -0.47
HMGN1-213ENST00000482192 SNX11Q9Y5W9 270 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 ACTL7AQ9Y615 435 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 DOCK4Q8N1I0 1966 aa12.1□□□□□ -0.47
HMGN1-213ENST00000482192 KRIT1O00522 736 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 TMCC1O94876 653 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 CYP1A2P05177 515 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 TPM1P09493 284 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 CD38P28907 300 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 MAT2AP31153 395 aaKnown RBP12.09□□□□□ -0.47
HMGN1-213ENST00000482192 HCAR3P49019 387 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 NEK3P51956 506 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 NDST2P52849 883 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 SERINC3Q13530 473 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 INO80DQ53TQ3 878 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-213ENST00000482192 PPP6R3Q5H9R7 873 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-213ENST00000482192 CCDC122Q5T0U0 273 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 CYP4V2Q6ZWL3 525 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-213ENST00000482192 VSTM4Q8IW00 320 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 NAXDQ8IW45 347 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 NIPA2Q8N8Q9 360 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 OR8K1Q8NGG5 319 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 GDAP1L1Q96MZ0 367 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 KCTD15Q96SI1 283 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-213ENST00000482192 DNAJC7Q99615 494 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 NUP85Q9BW27 656 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 OSBPL1AQ9BXW6 950 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 LRRC19Q9H756 370 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 ZWILCHQ9H900 591 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 ZNHIT6Q9NWK9 470 aaKnown RBP12.09□□□□□ -0.47
HMGN1-213ENST00000482192 IP6K2Q9UHH9 426 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 ANAPC7Q9UJX3 599 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 PCDHGB2Q9Y5G2 931 aa12.09□□□□□ -0.47
HMGN1-213ENST00000482192 A0A1W2PQU0 124 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 PRAMEF26H0Y7S4 382 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 RNF103O00237 685 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 SH3BP5O60239 455 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 DFNA5O60443 496 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 RNGTTO60942 597 aaKnown RBP12.08□□□□□ -0.48
HMGN1-213ENST00000482192 ABCB7O75027 752 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 POP4O95707 220 aaKnown RBP12.08□□□□□ -0.48
HMGN1-213ENST00000482192 IGSF6O95976 241 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 ADRB3P13945 408 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 PMLP29590 882 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 EIF4A3P38919 411 aaKnown RBP12.08□□□□□ -0.48
HMGN1-213ENST00000482192 CTSKP43235 329 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 CCT8P50990 548 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 RHOAP61586 193 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 SUZ12Q15022 739 aaKnown RBP12.08□□□□□ -0.48
HMGN1-213ENST00000482192 ZNF423Q2M1K9 1284 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 TSR1Q2NL82 804 aaKnown RBP12.08□□□□□ -0.48
HMGN1-213ENST00000482192 BOLA3Q53S33 107 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 KCNT1Q5JUK3 1230 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 FBXL19Q6PCT2 694 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 OR6K2Q8NGY2 324 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 KLC2Q9H0B6 622 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 NENFQ9UMX5 172 aa12.08□□□□□ -0.48
HMGN1-213ENST00000482192 ADAMTS9Q9P2N4 1935 aa12.07□□□□□ -0.48
HMGN1-213ENST00000482192 SPAARA0A1B0GVQ0 90 aa12.07□□□□□ -0.48
HMGN1-213ENST00000482192 A0A1W2PR77 199 aa12.07□□□□□ -0.48
HMGN1-213ENST00000482192 ARHGAP42A6NI28 874 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms