RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 CFAP61Q8NHU2 1237 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 RAB3IL1Q8TBN0 382 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 KCNV2Q8TDN2 545 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 E2F7Q96AV8 911 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 TRIM43Q96BQ3 446 aaPredicted RBP14.67□□□□□ -0.06
CHD3-211ENST00000481999 CERS2Q96G23 380 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 DCLRE1BQ9H816 532 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 CAB39LQ9H9S4 337 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 CYP4F11Q9HBI6 524 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 ZNF358Q9NW07 568 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 SIRPGQ9P1W8 387 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 ZFATQ9P243 1243 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 MTRRQ9UBK8 725 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 TPP1O14773 563 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 GYG2O15488 501 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 FGF10O15520 208 aaPredicted RBP14.67□□□□□ -0.06
CHD3-211ENST00000481999 HOXA2O43364 376 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 LUC7L3O95232 432 aaKnown RBP14.67□□□□□ -0.06
CHD3-211ENST00000481999 EFEMP2O95967 443 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 IRF1P10914 325 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 CCNCP24863 283 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 TMPRSS15P98073 1019 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 TAF11Q15544 211 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 MIEF2Q96C03 454 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 TMEM175Q9BSA9 504 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 FICDQ9BVA6 458 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 ZYG11BQ9C0D3 744 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 RNF38Q9H0F5 515 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 SLC2A6Q9UGQ3 507 aa14.67□□□□□ -0.06
CHD3-211ENST00000481999 C2orf71A6NGG8 1288 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 FCHO1O14526 889 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 MATN3O15232 486 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 GSC2O15499 205 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 ENTPD5O75356 428 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 POLBP06746 335 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 ESRRAP11474 423 aaPredicted RBP14.66□□□□□ -0.06
CHD3-211ENST00000481999 RPS24P62847 133 aaKnown RBP14.66□□□□□ -0.06
CHD3-211ENST00000481999 TRIP4Q15650 581 aaPredicted RBP14.66□□□□□ -0.06
CHD3-211ENST00000481999 ZCCHC23Q6ZST2 131 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 BTN2A3PQ96KV6 586 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 CYP2S1Q96SQ9 504 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 NACA2Q9H009 215 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 NT5MQ9NPB1 228 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 SMPD4Q9NXE4 827 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 CLIC5Q9NZA1 410 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 BFARQ9NZS9 450 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 TRHDEQ9UKU6 1024 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 LRRC42Q9Y546 428 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 RAD54BQ9Y620 910 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 FAM237BA0A1B0GVD1 139 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 RTN3O95197 1032 aaPredicted RBP14.66□□□□□ -0.06
CHD3-211ENST00000481999 KLKB1P03952 638 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 CNTFP26441 200 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 CRHR1P34998 444 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 CA8P35219 290 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 CDK18Q07002 472 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 ITKQ08881 620 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 BST1Q10588 318 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 ELAVL2Q12926 359 aaKnown RBP14.66□□□□□ -0.06
CHD3-211ENST00000481999 PLD1Q13393 1074 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 ANKRD20A4Q4UJ75 823 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 AFMIDQ63HM1 303 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 ITPRIPL1Q6GPH6 555 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 CYS1Q717R9 158 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 DENND1CQ8IV53 801 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHD3-211ENST00000481999 SLC25A41Q8N5S1 370 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 TTC8Q8TAM2 541 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 BHMTQ93088 406 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 TOP1MTQ969P6 601 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 MCUR1Q96AQ8 359 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 IL12RB2Q99665 862 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 CRISPLD2Q9H0B8 497 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 MMADHCQ9H3L0 296 aaPredicted RBP14.66□□□□□ -0.06
CHD3-211ENST00000481999 GLOD4Q9HC38 313 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHD3-211ENST00000481999 ZNF212Q9UDV6 495 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 PRUNE2Q8WUY3 3088 aa14.66□□□□□ -0.06
CHD3-211ENST00000481999 H7C4K7 107 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 CCL22O00626 93 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 BIRC5O15392 142 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 COCHO43405 550 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 HMGA1P17096 107 aaKnown RBP14.65□□□□□ -0.06
CHD3-211ENST00000481999 OR1E1P30953 314 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 DSC2Q02487 901 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 DENND5AQ6IQ26 1287 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 TMEM135Q86UB9 458 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 NUDCD3Q8IVD9 361 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 RNF168Q8IYW5 571 aaPredicted RBP14.65□□□□□ -0.06
CHD3-211ENST00000481999 NAF1Q96HR8 494 aaKnown RBP14.65□□□□□ -0.06
CHD3-211ENST00000481999 SPATA17Q96L03 361 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 C1orf74Q96LT6 269 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 TSGA13Q96PP4 275 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 SLC22A12Q96S37 553 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 MTSS1O43312 755 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 IGLV3-27P01718 113 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 PRKCGP05129 697 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 ITGA2BP08514 1039 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 CLTBP09497 229 aa14.65□□□□□ -0.06
CHD3-211ENST00000481999 ZDHHC11BP0C7U3 371 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms