RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ARL4CP56559 192 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 AP1S1P61966 158 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 ARF5P84085 180 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 ECT2LQ008S8 904 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 SLC10A7Q0GE19 358 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 TRIP13Q15645 432 aaPredicted RBP10.33□□□□□ -0.76
USP39-215ENST00000481409 CCDC85BQ15834 202 aaPredicted RBP10.33□□□□□ -0.76
USP39-215ENST00000481409 ZDHHC24Q6UX98 284 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 ARHGAP36Q6ZRI8 547 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 Q7L0L9 218 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 CCNJLQ8IV13 435 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 PDIK1LQ8N165 341 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 PCDH20Q8N6Y1 951 aaKnown RBP10.33□□□□□ -0.76
USP39-215ENST00000481409 CNTD1Q8N815 330 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 FBXO25Q8TCJ0 367 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 WFDC5Q8TCV5 224 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 PRCCQ92733 491 aaPredicted RBP10.33□□□□□ -0.76
USP39-215ENST00000481409 CAVIN3Q969G5 261 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 TADA1Q96BN2 335 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 ASIC4Q96FT7 647 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 IMP4Q96G21 291 aaKnown RBP10.33□□□□□ -0.76
USP39-215ENST00000481409 AGAP3Q96P47 875 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 NUDCD1Q96RS6 583 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 KXD1Q9BQD3 176 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 PLA2G2FQ9BZM2 168 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 TRIM31Q9BZY9 425 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 C10orf88Q9H8K7 445 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 ARFGAP3Q9NP61 516 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 DNAJC17Q9NVM6 304 aaKnown RBP10.33□□□□□ -0.76
USP39-215ENST00000481409 FAM153AQ9UHL3 310 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 KIAA1549LQ6ZVL6 1849 aa10.33□□□□□ -0.76
USP39-215ENST00000481409 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.32□□□□□ -0.76
USP39-215ENST00000481409 ESYT3A0FGR9 886 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 C2CD4DB7Z1M9 353 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 ATP9BO43861 1147 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 METTL18O95568 372 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 GSRP00390 522 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 HLA-DQB2P05538 268 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 APRTP07741 180 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 SERPINF2P08697 491 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 DLDP09622 509 aaKnown RBP10.32□□□□□ -0.76
USP39-215ENST00000481409 ARSAP15289 507 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 TSHRP16473 764 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 NFKB1P19838 968 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 PSMB4P28070 264 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 ECHS1P30084 290 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 CD68P34810 354 aaPredicted RBP10.32□□□□□ -0.76
USP39-215ENST00000481409 GJA4P35212 333 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 GRIA2P42262 883 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 VPS41P49754 854 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 SNRPD1P62314 119 aaKnown RBP10.32□□□□□ -0.76
USP39-215ENST00000481409 LAMB3Q13751 1172 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 GRM2Q14416 872 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 GAB4Q2WGN9 574 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 DNAJC21Q5F1R6 531 aaKnown RBP10.32□□□□□ -0.76
USP39-215ENST00000481409 MBLAC2Q68D91 279 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 KCTD11Q693B1 232 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 TRIM68Q6AZZ1 485 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 PTCRAQ6ISU1 281 aaPredicted RBP10.32□□□□□ -0.76
USP39-215ENST00000481409 CENPUQ71F23 418 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 ADIPOR2Q86V24 386 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 RALGPS2Q86X27 583 aaPredicted RBP10.32□□□□□ -0.76
USP39-215ENST00000481409 APCDD1Q8J025 514 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 MREGQ8N565 214 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 SH2D3CQ8N5H7 860 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 CCDC33Q8N5R6 958 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 TERB1Q8NA31 727 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 AENQ8WTP8 325 aaKnown RBP10.32□□□□□ -0.76
USP39-215ENST00000481409 ANKRD7Q92527 254 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 BHMTQ93088 406 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 LRIG1Q96JA1 1093 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 TTC25Q96NG3 672 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 TUBGCP5Q96RT8 1024 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 SRPK1Q96SB4 655 aaKnown RBP10.32□□□□□ -0.76
USP39-215ENST00000481409 NAT9Q9BTE0 207 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 KCNK12Q9HB15 430 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 ARNT2Q9HBZ2 717 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 NT5MQ9NPB1 228 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 SLC2A4RGQ9NR83 387 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 INTS6Q9UL03 887 aaKnown RBP10.32□□□□□ -0.76
USP39-215ENST00000481409 NFU1Q9UMS0 254 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 PLA2G4CQ9UP65 541 aa10.32□□□□□ -0.76
USP39-215ENST00000481409 MAGEB16A2A368 324 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 LOC730098B7Z3J9 87 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 E7ESA3 106 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 TP73O15350 636 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 INSIG1O15503 277 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 TMCC1O94876 653 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 CD160O95971 181 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 IGSF6O95976 241 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 APODP05090 189 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 CR2P20023 1033 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 TNFRSF4P43489 277 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 NPY2RP49146 381 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 RPL26P61254 145 aaKnown RBP10.31□□□□□ -0.76
USP39-215ENST00000481409 RHOAP61586 193 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 ST8SIA6P61647 398 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 MRPS25P82663 173 aaKnown RBP10.31□□□□□ -0.76
USP39-215ENST00000481409 RAD51Q06609 339 aa10.31□□□□□ -0.76
USP39-215ENST00000481409 NAA30Q147X3 362 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms