RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 ZDHHC7Q9NXF8 308 aa3.29□□□□□ -1.88
FN1-221ENST00000480737 PLEKHB1Q9UF11 243 aaPredicted RBP3.29□□□□□ -1.88
FN1-221ENST00000480737 KCNG2Q9UJ96 466 aa3.29□□□□□ -1.88
FN1-221ENST00000480737 FBXO4Q9UKT5 387 aa3.29□□□□□ -1.88
FN1-221ENST00000480737 SLC39A10Q9ULF5 831 aa3.29□□□□□ -1.88
FN1-221ENST00000480737 CKAP5Q14008 2032 aa3.29□□□□□ -1.88
FN1-221ENST00000480737 NKTRP30414 1462 aaKnown RBP3.28□□□□□ -1.88
FN1-221ENST00000480737 SRRM3A6NNA2 597 aaPredicted RBP3.28□□□□□ -1.88
FN1-221ENST00000480737 KIF28PB7ZC32 967 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 MS4A18H0YCH9 400 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 PRC1O43663 620 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 PAPSS2O95340 614 aaPredicted RBP3.28□□□□□ -1.88
FN1-221ENST00000480737 GNALP38405 381 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 AK2P54819 239 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 SF3A3Q12874 501 aaKnown RBP eCLIP3.28□□□□□ -1.889e-32■■■■■ 52.8
FN1-221ENST00000480737 FNBP1LQ5T0N5 605 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 TMEM71Q6P5X7 295 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 PRSS57Q6UWY2 283 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 IGFN1Q86VF2 1251 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 FAM217AQ8IXS0 508 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 DEPTORQ8TB45 409 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 PARD3BQ8TEW8 1205 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 DNASE2BQ8WZ79 361 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 NR4A3Q92570 626 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 EID2BQ96D98 161 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 ZNF419Q96HQ0 510 aaPredicted RBP3.28□□□□□ -1.88
FN1-221ENST00000480737 SGCZQ96LD1 299 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 CCDC138Q96M89 665 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 SLITRK1Q96PX8 696 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 FRG2BQ96QU4 278 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 CCDC134Q9H6E4 229 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 PHTF1Q9UMS5 762 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 PCDHGB2Q9Y5G2 931 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 RIMBP3CA6NJZ7 1639 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 RIMBP3BA6NNM3 1639 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 RIMBP3Q9UFD9 1639 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 MAP3K4Q9Y6R4 1608 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 ADGRB3O60242 1522 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 MED14O60244 1454 aa3.28□□□□□ -1.88
FN1-221ENST00000480737 NOS1P29475 1434 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 CEP152O94986 1710 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 SPHKAPQ2M3C7 1700 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 ANKRD36BQ8N2N9 1353 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 ABCC11Q96J66 1382 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 IQGAP1P46940 1657 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TCF20Q9UGU0 1960 aaKnown RBP3.27□□□□□ -1.89
FN1-221ENST00000480737 IL16Q14005 1332 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TBC1D3DA0A087WVF3 549 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TBC1D3IA0A087WXS9 549 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TBC1D3EA0A087X179 549 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TBC1D3KA0A087X1G2 549 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TBC1D3BA6NDS4 549 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TBC1D3FA6NER0 549 aaPredicted RBP3.27□□□□□ -1.89
FN1-221ENST00000480737 GOLGA6L3A6NEY3 463 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 SMTNL1A8MU46 457 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 BTBD18B2RXH4 712 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TBC1D3LB9A6J9 549 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 PIP5K1BO14986 540 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 DNPH1O43598 174 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 ASNA1O43681 348 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TBC1D3HP0C7X1 549 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 FCGR1AP12314 374 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 PEPDP12955 493 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 UNGP13051 313 aaPredicted RBP3.27□□□□□ -1.89
FN1-221ENST00000480737 HOXB9P17482 250 aaPredicted RBP3.27□□□□□ -1.89
FN1-221ENST00000480737 PAX3P23760 479 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 POU5F1BQ06416 359 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TRAF2Q12933 501 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 FOXD4Q12950 439 aaPredicted RBP3.27□□□□□ -1.89
FN1-221ENST00000480737 HNF4GQ14541 408 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TBRG1Q3YBR2 411 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TDRD12Q587J7 1177 aaKnown RBP3.27□□□□□ -1.89
FN1-221ENST00000480737 ARL13AQ5H913 290 aaPredicted RBP3.27□□□□□ -1.89
FN1-221ENST00000480737 TBC1D3GQ6DHY5 549 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TBC1D3CQ6IPX1 549 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 SLC30A9Q6PML9 568 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.27□□□□□ -1.899e-67■□□□□ 10.2
FN1-221ENST00000480737 C16orf82Q7Z2V1 217 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 ANKS1BQ7Z6G8 1248 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TMEM200AQ86VY9 491 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 GATAD2AQ86YP4 633 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 TBC1D3Q8IZP1 549 aaPredicted RBP3.27□□□□□ -1.89
FN1-221ENST00000480737 TMEM217Q8N7C4 229 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 FAM71BQ8TC56 605 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 WFIKKN2Q8TEU8 576 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 HDAC7Q8WUI4 952 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 LMLNQ96KR4 655 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 PRPF18Q99633 342 aaKnown RBP3.27□□□□□ -1.89
FN1-221ENST00000480737 MYD88Q99836 296 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 SORBS1Q9BX66 1292 aaKnown RBP3.27□□□□□ -1.89
FN1-221ENST00000480737 TMEM120AQ9BXJ8 343 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 MAF1Q9H063 256 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 UPF2Q9HAU5 1272 aaKnown RBP3.27□□□□□ -1.89
FN1-221ENST00000480737 TMEM248Q9NWD8 314 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 PNMA2Q9UL42 364 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 PCDHGB1Q9Y5G3 927 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 NPATQ14207 1427 aa3.27□□□□□ -1.89
FN1-221ENST00000480737 KDM5AP29375 1690 aaKnown RBP3.27□□□□□ -1.89
FN1-221ENST00000480737 MYO3AQ8NEV4 1616 aa3.26□□□□□ -1.89
FN1-221ENST00000480737 USP32Q8NFA0 1604 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms