RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 SLC4A5Q9BY07 1137 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 ERVMER34-1Q9H9K5 563 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 UCKL1Q9NWZ5 548 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 DDIT4Q9NX09 232 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 RRN3Q9NYV6 651 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 COX16Q9P0S2 106 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 SLCO3A1Q9UIG8 710 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 DNAJC12Q9UKB3 198 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 SCML1Q9UN30 329 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 CNTN6Q9UQ52 1028 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 NAALADL1Q9UQQ1 740 aa6.83□□□□□ -1.32
VCP-205ENST00000479300 ITIH6Q6UXX5 1313 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 A0A1B0GVM2 712 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 CCDC151A5D8V7 595 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 GOLGA6L9A6NEM1 432 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 MAP2K7O14733 419 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 YKT6O15498 198 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 OPA1O60313 960 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 SASH3O75995 380 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 DXOO77932 396 aaKnown RBP6.82□□□□□ -1.32
VCP-205ENST00000479300 LUC7L3O95232 432 aaKnown RBP6.82□□□□□ -1.32
VCP-205ENST00000479300 SRPRAP08240 638 aaKnown RBP6.82□□□□□ -1.32
VCP-205ENST00000479300 TACR2P21452 398 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 EEF1GP26641 437 aaKnown RBP6.82□□□□□ -1.32
VCP-205ENST00000479300 PON1P27169 355 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 PSMD8P48556 350 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 ARRB1P49407 418 aaPredicted RBP6.82□□□□□ -1.32
VCP-205ENST00000479300 NUMBP49757 651 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 PCBP4P57723 403 aaKnown RBP6.82□□□□□ -1.32
VCP-205ENST00000479300 TMPRSS3P57727 454 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 RPS24P62847 133 aaKnown RBP6.82□□□□□ -1.32
VCP-205ENST00000479300 SKOR1P84550 965 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 RHDQ02161 417 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 SULT2A1Q06520 285 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 NME3Q13232 169 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 PDCLQ13371 301 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 ZC3H12AQ5D1E8 599 aaKnown RBP6.82□□□□□ -1.32
VCP-205ENST00000479300 MS4A13Q5J8X5 152 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 FKBP15Q5T1M5 1219 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 KIAA1614Q5VZ46 1190 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 E4F1Q66K89 784 aaPredicted RBP6.82□□□□□ -1.32
VCP-205ENST00000479300 RAP1GAP2Q684P5 730 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 NAPEPLDQ6IQ20 393 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 GJB7Q6PEY0 223 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 LRRC31Q6UY01 552 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 DSG4Q86SJ6 1040 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 TMEM110Q86TL2 294 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 TAC4Q86UU9 113 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 ZDHHC17Q8IUH5 632 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 EGFL6Q8IUX8 553 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 PASD1Q8IV76 773 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 DEFB106AQ8N104 65 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 CNPY4Q8N129 248 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 CFAP52Q8N1V2 620 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 STK40Q8N2I9 435 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 GPATCH11Q8N954 259 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 TMEM35BQ8NCS4 154 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 C1orf131Q8NDD1 294 aaKnown RBP6.82□□□□□ -1.32
VCP-205ENST00000479300 ZNF248Q8NDW4 579 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 SHC3Q92529 594 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 PTPRN2Q92932 1015 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 POM121Q96HA1 1249 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 FCRL2Q96LA5 508 aaPredicted RBP6.82□□□□□ -1.32
VCP-205ENST00000479300 OMDQ99983 421 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 ZSWIM1Q9BR11 485 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 NDST4Q9H3R1 872 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 ASNSD1Q9NWL6 643 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 SLC25A13Q9UJS0 675 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 SARDHQ9UL12 918 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 FZD4Q9ULV1 537 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 STAP1Q9ULZ2 295 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 SUFUQ9UMX1 484 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 PCDHGC3Q9UN70 934 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 ERVW-1Q9UQF0 538 aa6.82□□□□□ -1.32
VCP-205ENST00000479300 UTP20O75691 2785 aaKnown RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 LRRK2Q5S007 2527 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 EDDM13A0A1B0GTR0 161 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 TARSL2A2RTX5 802 aaKnown RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 LRRC72A6NJI9 287 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 KCNU1A8MYU2 1149 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 M0QYT0 321 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 RNF103O00237 685 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 RTN2O75298 545 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 WISP1O95388 367 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 F9P00740 461 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 FYNP06241 537 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 ZNF18P17022 549 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 GOT1P17174 413 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 DESP17661 470 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 DGKAP23743 735 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 MZF1P28698 734 aaPredicted RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 MAT2AP31153 395 aaKnown RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 NOS2P35228 1153 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 RPL34P49207 117 aaKnown RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 STK19P49842 368 aaPredicted RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 TAS2R38P59533 333 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 RNASE9P60153 205 aaKnown RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 GABREP78334 506 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 KRT83P78385 493 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms