RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ZNF445P59923 1031 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 BTKQ06187 659 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 LAYNQ6UX15 382 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 KDM7AQ6ZMT4 941 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 COPS6Q7L5N1 327 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 STRADAQ7RTN6 431 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SETD6Q8TBK2 473 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SPRYD4Q8WW59 207 aaPredicted RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 TMEM159Q96B96 161 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 CENPNQ96H22 339 aaPredicted RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 TMEM169Q96HH4 297 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 TMEM120AQ9BXJ8 343 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ZBTB3Q9H5J0 574 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ZFYVE28Q9HCC9 887 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SLC39A9Q9NUM3 307 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 CLIC5Q9NZA1 410 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 GGT7Q9UJ14 662 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 MYH7P12883 1935 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 A0A0G2JPF8 293 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 HNRNPCL3B7ZW38 293 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 GLSO94925 669 aaPredicted RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 EIF4EP06730 217 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 HNRNPCL4P0DMR1 293 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 CYP2C9P11712 490 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 GEMP55040 296 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 RRAS2P62070 204 aaPredicted RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 PLOD1Q02809 727 aaPredicted RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 CCNIQ14094 377 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 IL31Q6EBC2 164 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SLC51BQ86UW2 128 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 CHSY1Q86X52 802 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 PDSS2Q86YH6 399 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ANKK1Q8NFD2 765 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 OR2L3Q8NG85 312 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 TEX47Q8TBZ9 253 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ROGDIQ9GZN7 287 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 RAPGEFL1Q9UHV5 662 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 RBMX2Q9Y388 322 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 DHRS7Q9Y394 339 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 YTHDF2Q9Y5A9 579 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 HEBP2Q9Y5Z4 205 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 KIAA0586Q9BVV6 1533 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 GCC2Q8IWJ2 1684 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ENO4A6NNW6 628 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 F5H5T6 163 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 AIREO43918 545 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 RPP40O75818 363 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 ASGR1P07306 291 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SEC24CP53992 1094 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 TYSND1Q2T9J0 566 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 PGBD2Q6P3X8 592 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 KDELC1Q6UW63 502 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 RTL4Q6ZR62 310 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 KIAA0907Q7Z7F0 614 aaPredicted RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 HPS6Q86YV9 775 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 HSPA12BQ96MM6 686 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 CLIC6Q96NY7 704 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ATF6BQ99941 703 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 C17orf62Q9BQA9 187 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 CADM1Q9BY67 442 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 NUAK2Q9H093 628 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 WDR26Q9H7D7 661 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ZNF302Q9NR11 478 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 FARSBQ9NSD9 589 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 RRP15Q9Y3B9 282 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 CLUHO75153 1309 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 XDHP47989 1333 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 CASKIN1Q8WXD9 1431 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 RIMS2Q9UQ26 1411 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ILVBLA1L0T0 632 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 MBD4O95243 580 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 AGR2O95994 175 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 PTPRAP18433 802 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 HTR2BP41595 481 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SLC9B1Q4ZJI4 515 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 XRRA1Q6P2D8 792 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 NLRP10Q86W26 655 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 BHLHE22Q8NFJ8 381 aaPredicted RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 MRPL9Q9BYD2 267 aaKnown RBP5.49□□□□□ -1.53
USF3-202ENST00000478658 MUC13Q9H3R2 512 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ABCD2Q9UBJ2 740 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 ZMYM5Q9UJ78 669 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 CFL2Q9Y281 166 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 PCDHGA5Q9Y5G8 931 aa5.49□□□□□ -1.53
USF3-202ENST00000478658 SULT1B1O43704 296 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 OTCP00480 354 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 NR2F1P10589 423 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 ATP1A3P13637 1013 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 ITGA8P53708 1063 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 RBP5P82980 135 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 POLA2Q14181 598 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 MED22Q15528 200 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 DALRD3Q5D0E6 543 aaKnown RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 BEND6Q5SZJ8 279 aaPredicted RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 AHSA2Q719I0 299 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 WDR49Q8IV35 697 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 CPT1CQ8TCG5 803 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 FKBP10Q96AY3 582 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 APOPT1Q96IL0 206 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 ZNF578Q96N58 590 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms