RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 V9GYY5 206 aaPredicted RBP11.92□□□□□ -0.5
PDCD11-204ENST00000478543 FASNP49327 2511 aaKnown RBP11.92□□□□□ -0.5
PDCD11-204ENST00000478543 DSPP15924 2871 aaKnown RBP11.91□□□□□ -0.5
PDCD11-204ENST00000478543 CFAP69A5D8W1 941 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 C1QTNF9BB2RNN3 333 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 F5H423 210 aaPredicted RBP11.91□□□□□ -0.5
PDCD11-204ENST00000478543 RNF103O00237 685 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 TM4SF5O14894 197 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 KDELR3O43731 214 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 PRAMEF11O60813 436 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 RHOXF2BP0C7M4 288 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 CISD3P0C7P0 127 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 C1QTNF9P0C862 333 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 ZSCAN5DPP0CG00 497 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 CCNCP24863 283 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 OPRD1P41143 372 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 VPS41P49754 854 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 TERF1P54274 439 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 IL10RBQ08334 325 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 MESP2Q0VG99 397 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 ZBTB17Q13105 803 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 DHX34Q14147 1143 aaKnown RBP11.91□□□□□ -0.5
PDCD11-204ENST00000478543 PPP1R7Q15435 360 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 GEN1Q17RS7 908 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 TIGD7Q6NT04 549 aaPredicted RBP11.91□□□□□ -0.5
PDCD11-204ENST00000478543 LINGO4Q6UY18 593 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 JAMLQ86YT9 394 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 LRRC49Q8IUZ0 686 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 ETFBKMTQ8IXQ9 262 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 TAB3Q8N5C8 712 aaPredicted RBP11.91□□□□□ -0.5
PDCD11-204ENST00000478543 CCDC89Q8N998 374 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 DCAF4L2Q8NA75 395 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 GLIS1Q8NBF1 620 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 CCDC26Q8TAB7 109 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 TSGA13Q96PP4 275 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 RHOXF2Q9BQY4 288 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 LRRC1Q9BTT6 524 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 ACE2Q9BYF1 805 aaPredicted RBP11.91□□□□□ -0.5
PDCD11-204ENST00000478543 USP29Q9HBJ7 922 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 HEBP1Q9NRV9 189 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 DEC1Q9P2X7 70 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 VPS51Q9UID3 782 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 FBXO10Q9UK96 956 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 HPCAL4Q9UM19 191 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 CELSR3Q9NYQ7 3312 aa11.91□□□□□ -0.5
PDCD11-204ENST00000478543 SHROOM3Q8TF72 1996 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 MATN3O15232 486 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 ZMPSTE24O75844 475 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 NEBLO76041 1014 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 STK10O94804 968 aaKnown RBP11.9□□□□□ -0.5
PDCD11-204ENST00000478543 GAS8O95995 478 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 JCHAINP01591 159 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 KRT14P02533 472 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 PTPN3P26045 913 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 CTSOP43234 321 aaPredicted RBP11.9□□□□□ -0.5
PDCD11-204ENST00000478543 RPS9P46781 194 aaKnown RBP11.9□□□□□ -0.5
PDCD11-204ENST00000478543 PLK1P53350 603 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 ARF5P84085 180 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 SHC2P98077 582 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 SLC7A5Q01650 507 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 WASHC5Q12768 1159 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 SLC12A1Q13621 1099 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 GAS6Q14393 721 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 ITPR1Q14643 2758 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 MBLAC2Q68D91 279 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 LAIR1Q6GTX8 287 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 AHI1Q8N157 1196 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDCD11-204ENST00000478543 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDCD11-204ENST00000478543 CCDC110Q8TBZ0 833 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 NSMCE1Q8WV22 266 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 NUP205Q92621 2012 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 CHFRQ96EP1 664 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 FERMT1Q9BQL6 677 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 C2orf49Q9BVC5 232 aaPredicted RBP11.9□□□□□ -0.5
PDCD11-204ENST00000478543 TRIM31Q9BZY9 425 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 CIPCQ9C0C6 399 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 PDFQ9HBH1 243 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 KLHL8Q9P2G9 620 aaPredicted RBP11.9□□□□□ -0.5
PDCD11-204ENST00000478543 UBA2Q9UBT2 640 aaPredicted RBP11.9□□□□□ -0.5
PDCD11-204ENST00000478543 ASIC3Q9UHC3 531 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 FEZ2Q9UHY8 353 aaPredicted RBP11.9□□□□□ -0.5
PDCD11-204ENST00000478543 TTLL3Q9Y4R7 772 aa11.9□□□□□ -0.5
PDCD11-204ENST00000478543 SETXQ7Z333 2677 aaKnown RBP11.9□□□□□ -0.5
PDCD11-204ENST00000478543 CNOT1A5YKK6 2376 aaKnown RBP11.89□□□□□ -0.51
PDCD11-204ENST00000478543 KIAA1549LQ6ZVL6 1849 aa11.89□□□□□ -0.51
PDCD11-204ENST00000478543 FAM187AA6NFU0 413 aa11.89□□□□□ -0.51
PDCD11-204ENST00000478543 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.89□□□□□ -0.51
PDCD11-204ENST00000478543 MTSS1O43312 755 aa11.89□□□□□ -0.51
PDCD11-204ENST00000478543 HRO43593 1189 aa11.89□□□□□ -0.51
PDCD11-204ENST00000478543 HEXIM1O94992 359 aaKnown RBP11.89□□□□□ -0.51
PDCD11-204ENST00000478543 PEX11BO96011 259 aa11.89□□□□□ -0.51
PDCD11-204ENST00000478543 PROS1P07225 676 aa11.89□□□□□ -0.51
PDCD11-204ENST00000478543 CCNB1P14635 433 aa11.89□□□□□ -0.51
PDCD11-204ENST00000478543 POLR2EP19388 210 aaKnown RBP11.89□□□□□ -0.51
PDCD11-204ENST00000478543 STIP1P31948 543 aaKnown RBP11.89□□□□□ -0.51
PDCD11-204ENST00000478543 RPL22P35268 128 aaKnown RBP11.89□□□□□ -0.51
PDCD11-204ENST00000478543 STK19P49842 368 aaPredicted RBP11.89□□□□□ -0.51
PDCD11-204ENST00000478543 IFI35P80217 286 aaPredicted RBP11.89□□□□□ -0.51
PDCD11-204ENST00000478543 ZNF33AQ06730 810 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms