RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 BRD8Q9H0E9 1235 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 Q9H521 79 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 GALNT8Q9NY28 637 aa9.91□□□□□ -0.82
CMC1-209ENST00000477739 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.91□□□□□ -0.82
CMC1-209ENST00000477739 EVLQ9UI08 416 aaPredicted RBP9.91□□□□□ -0.82
CMC1-209ENST00000477739 UBQLN1Q9UMX0 589 aaKnown RBP9.91□□□□□ -0.82
CMC1-209ENST00000477739 LRRC14BA6NHZ5 514 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 SH3BGRLO75368 114 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 ZBTB11O95625 1053 aaPredicted RBP9.9□□□□□ -0.82
CMC1-209ENST00000477739 UQCRBP14927 111 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 NCK1P16333 377 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 SMPD1P17405 629 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 GRM5P41594 1212 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 CHN2P52757 468 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 IL23RQ5VWK5 629 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 MILR1Q7Z6M3 343 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 CHSY1Q86X52 802 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 CLVS1Q8IUQ0 354 aaPredicted RBP9.9□□□□□ -0.82
CMC1-209ENST00000477739 PQLC1Q8N2U9 271 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 ZNF512Q96ME7 567 aaPredicted RBP9.9□□□□□ -0.82
CMC1-209ENST00000477739 C7orf26Q96N11 449 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 SPATA16Q9BXB7 569 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 ADNPQ9H2P0 1102 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 LRRC40Q9H9A6 602 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 GBA2Q9HCG7 927 aaPredicted RBP9.9□□□□□ -0.82
CMC1-209ENST00000477739 NT5MQ9NPB1 228 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 ARHGEF38Q9NXL2 777 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 PRG3Q9Y2Y8 225 aaPredicted RBP9.9□□□□□ -0.82
CMC1-209ENST00000477739 TTC3P53804 2025 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 MYBPHLA2RUH7 354 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 TRDMT1O14717 391 aaKnown RBP9.9□□□□□ -0.82
CMC1-209ENST00000477739 PGAM1P18669 254 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 GRIA2P42262 883 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 ECT2LQ008S8 904 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 BST2Q10589 180 aaKnown RBP9.9□□□□□ -0.82
CMC1-209ENST00000477739 TAPT1Q6NXT6 567 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 RNF111Q6ZNA4 994 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 FBXW8Q8N3Y1 598 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 FSTL5Q8N475 847 aaPredicted RBP9.9□□□□□ -0.82
CMC1-209ENST00000477739 EFHBQ8N7U6 833 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 SKA2Q8WVK7 121 aaPredicted RBP9.9□□□□□ -0.82
CMC1-209ENST00000477739 ZNF560Q96MR9 790 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 C1orf50Q9BV19 199 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 NACA2Q9H009 215 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 OR12D3Q9UGF7 316 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 KCNH4Q9UQ05 1017 aa9.9□□□□□ -0.82
CMC1-209ENST00000477739 DOCK1Q14185 1865 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 MOXD2PA6NHM9 499 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 SIX3O95343 332 aaPredicted RBP9.9□□□□□ -0.83
CMC1-209ENST00000477739 FESP07332 822 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 ZFXP17010 805 aaPredicted RBP9.9□□□□□ -0.83
CMC1-209ENST00000477739 FDFT1P37268 417 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 SERPINB8P50452 374 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 ZBTB17Q13105 803 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 CARTPTQ16568 116 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 ANKRD20A4Q4UJ75 823 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 PIM3Q86V86 326 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 OR10Q1Q8NGQ4 319 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 SCAMP5Q8TAC9 235 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 HSPBAP1Q96EW2 488 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 TNIP3Q96KP6 325 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 C16orf70Q9BSU1 422 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 RBM22Q9NW64 420 aaKnown RBP eCLIP9.9□□□□□ -0.83
CMC1-209ENST00000477739 ABI2Q9NYB9 513 aaPredicted RBP9.9□□□□□ -0.83
CMC1-209ENST00000477739 SIRPGQ9P1W8 387 aa9.9□□□□□ -0.83
CMC1-209ENST00000477739 CASQ2O14958 399 aaPredicted RBP9.89□□□□□ -0.83
CMC1-209ENST00000477739 INPP4BO15327 924 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 PFKMP08237 780 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 MMP3P08254 477 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 CCDC166P0CW27 439 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 TAF6P49848 677 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 CDK7P50613 346 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 CCR3P51677 355 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 STX1BP61266 288 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 LSM3P62310 102 aaKnown RBP9.89□□□□□ -0.83
CMC1-209ENST00000477739 WASHC5Q12768 1159 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 KRT72Q14CN4 511 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 FAM187BQ17R55 369 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 C6orf10Q5SRN2 563 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 ZNF534Q76KX8 674 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 ZNF410Q86VK4 478 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 TUBGCP3Q96CW5 907 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 VPS50Q96JG6 964 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 CDH19Q9H159 772 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 PLAC1Q9HBJ0 212 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 GPAMQ9HCL2 828 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 ACOT9Q9Y305 439 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 TIMM22Q9Y584 194 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 ZNF646O15015 1829 aaPredicted RBP9.89□□□□□ -0.83
CMC1-209ENST00000477739 BTBD19C9JJ37 291 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 E7ESA3 106 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 FKBP6O75344 327 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 CRTAMO95727 393 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 CD4P01730 458 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 FAM200BP0CF97 657 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 ATXN8OSP0DMR3 200 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 BRCC3P46736 316 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 PIK3CGP48736 1102 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 RPS6KA3P51812 740 aa9.89□□□□□ -0.83
CMC1-209ENST00000477739 SLC7A2P52569 658 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms