RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 RHOAP61586 193 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 ZNF33AQ06730 810 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 SLC20A2Q08357 652 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 XRCC4Q13426 336 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 ENPP2Q13822 863 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 GAS6Q14393 721 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 PUM1Q14671 1186 aaKnown RBP eCLIP15.59■□□□□ 0.09
SEC13-215ENST00000477547 RFTN1Q14699 578 aaPredicted RBP15.59■□□□□ 0.09
SEC13-215ENST00000477547 STARD3Q14849 445 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 SIX1Q15475 284 aaPredicted RBP15.59■□□□□ 0.09
SEC13-215ENST00000477547 DLG2Q15700 870 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 Q6ZVU0 165 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 B4GALNT4Q76KP1 1039 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 DCLK2Q8N568 766 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 ACTRT1Q8TDG2 376 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 GABRG3Q99928 467 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 IER2Q9BTL4 223 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 TM6SF2Q9BZW4 377 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 CEP44Q9C0F1 390 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 MTG2Q9H4K7 406 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 SEPT10Q9P0V9 454 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 TTC7AQ9ULT0 858 aaPredicted RBP15.59■□□□□ 0.09
SEC13-215ENST00000477547 EML5Q05BV3 1969 aa15.59■□□□□ 0.09
SEC13-215ENST00000477547 GOLGA6L10A0A0M3HER8 536 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 EDDM13A0A1B0GTR0 161 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 WASH3PC4AMC7 463 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 KCNK1O00180 336 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 BNIP3LO60238 219 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 ADAM23O75077 832 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 ATG13O75143 517 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 NEBLO76041 1014 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 PEX11BO96011 259 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 MMP13P45452 471 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 SLC10A7Q0GE19 358 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 LBRQ14739 615 aaKnown RBP15.58■□□□□ 0.08
SEC13-215ENST00000477547 HNRNPA1L2Q32P51 320 aaKnown RBP15.58■□□□□ 0.08
SEC13-215ENST00000477547 INO80DQ53TQ3 878 aaPredicted RBP15.58■□□□□ 0.08
SEC13-215ENST00000477547 HEATR6Q6AI08 1181 aaKnown RBP15.58■□□□□ 0.08
SEC13-215ENST00000477547 BBS5Q8N3I7 341 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 PCDH20Q8N6Y1 951 aaKnown RBP15.58■□□□□ 0.08
SEC13-215ENST00000477547 SLC35B2Q8TB61 432 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 FRS2Q8WU20 508 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 C1orf54Q8WWF1 131 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 MAML1Q92585 1016 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 FATE1Q969F0 183 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 ERLEC1Q96DZ1 483 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 EXOC2Q96KP1 924 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 CCDC114Q96M63 670 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 HINFPQ9BQA5 517 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 FRMD8P1Q9BZ68 369 aaPredicted RBP15.58■□□□□ 0.08
SEC13-215ENST00000477547 TNKS2Q9H2K2 1166 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 LHX3Q9UBR4 397 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 SEPT3Q9UH03 358 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 PLXND1Q9Y4D7 1925 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 EPG5Q9HCE0 2579 aa15.58■□□□□ 0.08
SEC13-215ENST00000477547 ESPNB1AK53 854 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 MATN3O15232 486 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 MTSS1O43312 755 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 LIASO43766 372 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 SYNCRIPO60506 623 aaKnown RBP15.57■□□□□ 0.08
SEC13-215ENST00000477547 IGSF6O95976 241 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 CCNB1P14635 433 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 RECQLP46063 649 aaPredicted RBP15.57■□□□□ 0.08
SEC13-215ENST00000477547 IFI35P80217 286 aaPredicted RBP15.57■□□□□ 0.08
SEC13-215ENST00000477547 ZBTB17Q13105 803 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 MARC1Q5VT66 337 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 DARS2Q6PI48 645 aaKnown RBP15.57■□□□□ 0.08
SEC13-215ENST00000477547 SPEM1Q8N4L4 309 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 ZNF419Q96HQ0 510 aaPredicted RBP15.57■□□□□ 0.08
SEC13-215ENST00000477547 GDAP1L1Q96MZ0 367 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 AP1M1Q9BXS5 423 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 CEP41Q9BYV8 373 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 DLGAP2Q9P1A6 1054 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 DNPEPQ9ULA0 475 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 TTLL3Q9Y4R7 772 aa15.57■□□□□ 0.08
SEC13-215ENST00000477547 KMT2BQ9UMN6 2715 aaPredicted RBP15.56■□□□□ 0.08
SEC13-215ENST00000477547 CEP250Q9BV73 2442 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 CACNA1IQ9P0X4 2223 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 RNF103O00237 685 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 SIN3BO75182 1162 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 ZNF189O75820 626 aaPredicted RBP15.56■□□□□ 0.08
SEC13-215ENST00000477547 GSRP00390 522 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 HLA-DQB2P05538 268 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 RBL1P28749 1068 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 HSPA9P38646 679 aaKnown RBP15.56■□□□□ 0.08
SEC13-215ENST00000477547 RENBPP51606 427 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 MTAPQ13126 283 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 SNX1Q13596 522 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 HNRNPDQ14103 355 aaKnown RBP15.56■□□□□ 0.08
SEC13-215ENST00000477547 CYTH1Q15438 398 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 ATXN7L2Q5T6C5 722 aaPredicted RBP15.56■□□□□ 0.08
SEC13-215ENST00000477547 KIAA1211LQ6NV74 962 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 SYT13Q7L8C5 426 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 CREG2Q8IUH2 290 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 PRELID2Q8N945 189 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 TSEN2Q8NCE0 465 aaKnown RBP15.56■□□□□ 0.08
SEC13-215ENST00000477547 OR2AP1Q8NGE2 309 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 KIF18AQ8NI77 898 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 HTR3CQ8WXA8 447 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 PTPRN2Q92932 1015 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms