RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 FZD2Q14332 565 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 ALFQ53S48 1182 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 EFHC1Q5JVL4 640 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 PERM1Q5SV97 790 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 KIAA1161Q6NSJ0 714 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 INO80CQ6PI98 192 aaPredicted RBP6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 LRRC31Q6UY01 552 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 KYAT3Q6YP21 454 aaKnown RBP6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 FAM183BPQ6ZVS7 135 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 USP53Q70EK8 1073 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 ABI3BPQ7Z7G0 1075 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 C14orf80Q86SX3 495 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 RBFAQ8N0V3 343 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 EHBP1Q8NDI1 1231 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 TMIEQ8NEW7 156 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 OR2A12Q8NGT7 310 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 WDR36Q8NI36 951 aaKnown RBP6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 FAM174AQ8TBP5 190 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 ZNF606Q8WXB4 792 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 FAM131CQ96AQ9 280 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 ALG14Q96F25 216 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 IFT43Q96FT9 208 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 FEM1CQ96JP0 617 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 PPP1R13BQ96KQ4 1090 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 KREMEN1Q96MU8 473 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 SLC46A1Q96NT5 459 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 CCNL2Q96S94 520 aaPredicted RBP6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 CCDC3Q9BQI4 270 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 SLC4A5Q9BY07 1137 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 SLC13A1Q9BZW2 595 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 SCAND2PQ9GZW5 306 aaPredicted RBP6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 INTS2Q9H0H0 1204 aaKnown RBP6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 TKTL2Q9H0I9 626 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 MPP6Q9NZW5 540 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 SIRPGQ9P1W8 387 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 SPASTQ9UBP0 616 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 GULP1Q9UBP9 304 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 APOBEC3BQ9UH17 382 aaKnown RBP6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 HOOK1Q9UJC3 728 aaKnown RBP6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 CTNND2Q9UQB3 1225 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 HS3ST2Q9Y278 367 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 ATP6V1DQ9Y5K8 247 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 SNX10Q9Y5X0 201 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 U3KQA8 63 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 ZFC3H1O60293 1989 aaKnown RBP6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 A0A0D9SEW6 157 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 SPTY2D1-AS1A0A0U1RR47 76 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 FAM237AA0A1B0GTK4 181 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 A0A1W2PNU3 283 aaPredicted RBP6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 IGLON5A6NGN9 336 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 CASC3O15234 703 aaKnown RBP6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 RAD51BO15315 384 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 DAB1O75553 588 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 GJB6O95452 261 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 AFPP02771 609 aaKnown RBP6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 NME1P15531 152 aaKnown RBP6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 RPL34P49207 117 aaKnown RBP6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 STX17P56962 302 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 MCCD1P59942 119 aaPredicted RBP6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 CLN3Q13286 438 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 MTA1Q13330 715 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 TMEM259Q4ZIN3 620 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 PRRT3Q5FWE3 981 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 LRRC73Q5JTD7 316 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 FAXCQ5TGI0 409 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 RETSATQ6NUM9 610 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 ESRP1Q6NXG1 681 aaKnown RBP6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 DPY19L3Q6ZPD9 716 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 C11orf57Q6ZUT1 292 aaPredicted RBP6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 PARS2Q7L3T8 475 aaKnown RBP6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 BEND5Q7L4P6 421 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 TMEM110Q86TL2 294 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 VPS36Q86VN1 386 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 ZNF354CQ86Y25 554 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 PHACTR4Q8IZ21 702 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 DCAF4L2Q8NA75 395 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 C1orf131Q8NDD1 294 aaKnown RBP6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 OR7D4Q8NG98 312 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 OR6K2Q8NGY2 324 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 TPCN2Q8NHX9 752 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 BTN2A2Q8WVV5 523 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 NELFBQ8WX92 580 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 EXTL1Q92935 676 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 NAT6Q93015 286 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 PRR11Q96HE9 360 aaPredicted RBP6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 BMFQ96LC9 184 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 CEP63Q96MT8 703 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 GSDMAQ96QA5 445 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 CPXM1Q96SM3 734 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 PSMB7Q99436 277 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 HEPHQ9BQS7 1158 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 HDAC8Q9BY41 377 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 FOXP3Q9BZS1 431 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 TM6SF2Q9BZW4 377 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 PDCL3Q9H2J4 239 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 WDCPQ9H6R7 721 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 ATP13A1Q9HD20 1204 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 PLCB1Q9NQ66 1216 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 PISDQ9UG56 409 aa6.81□□□□□ -1.32
RTFDC1-206ENST00000477485 ITM2BQ9Y287 266 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms