RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 NUP62CLQ9H1M0 184 aa11.59□□□□□ -0.55
HDLBP-236ENST00000477477 GANQ9H2C0 597 aa11.59□□□□□ -0.55
HDLBP-236ENST00000477477 TAB2Q9NYJ8 693 aa11.59□□□□□ -0.55
HDLBP-236ENST00000477477 NOCTQ9UK39 431 aaKnown RBP11.59□□□□□ -0.55
HDLBP-236ENST00000477477 CLCA2Q9UQC9 943 aa11.59□□□□□ -0.55
HDLBP-236ENST00000477477 FCF1Q9Y324 198 aaKnown RBP11.59□□□□□ -0.55
HDLBP-236ENST00000477477 ACTL7AQ9Y615 435 aa11.59□□□□□ -0.55
HDLBP-236ENST00000477477 AK5Q9Y6K8 562 aa11.59□□□□□ -0.55
HDLBP-236ENST00000477477 ARID1BQ8NFD5 2236 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-236ENST00000477477 CXorf51AA0A1B0GTR3 108 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 FFAR2O15552 330 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 AP1G1O43747 822 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 CD160O95971 181 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 CYP1A1P04798 512 aaPredicted RBP11.58□□□□□ -0.56
HDLBP-236ENST00000477477 MMP8P22894 467 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 L1CAMP32004 1257 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 ACVRL1P37023 503 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 ETFBP38117 255 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 EIF2S3P41091 472 aaKnown RBP11.58□□□□□ -0.56
HDLBP-236ENST00000477477 DNA2P51530 1060 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 RPS21P63220 83 aaKnown RBP11.58□□□□□ -0.56
HDLBP-236ENST00000477477 E2F1Q01094 437 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 NRG1Q02297 640 aaPredicted RBP11.58□□□□□ -0.56
HDLBP-236ENST00000477477 MAPK8IP2Q13387 824 aaPredicted RBP11.58□□□□□ -0.56
HDLBP-236ENST00000477477 FGL2Q14314 439 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 RAB6CQ53S08 254 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 HS1BP3Q53T59 392 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 CT47A1Q5JQC4 288 aaPredicted RBP11.58□□□□□ -0.56
HDLBP-236ENST00000477477 KIAA1161Q6NSJ0 714 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 KYAT3Q6YP21 454 aaKnown RBP11.58□□□□□ -0.56
HDLBP-236ENST00000477477 Q6ZSR6 202 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 PTAR1Q7Z6K3 402 aaPredicted RBP11.58□□□□□ -0.56
HDLBP-236ENST00000477477 ZNF677Q86XU0 584 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 SNIP1Q8TAD8 396 aaKnown RBP11.58□□□□□ -0.56
HDLBP-236ENST00000477477 SLC20A1Q8WUM9 679 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 ISG20Q96AZ6 181 aaKnown RBP11.58□□□□□ -0.56
HDLBP-236ENST00000477477 TM6SF2Q9BZW4 377 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 RAB6CQ9H0N0 254 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 CAAP1Q9H8G2 361 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 GPR27Q9NS67 375 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 NEU3Q9UQ49 428 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 FADS3Q9Y5Q0 445 aa11.58□□□□□ -0.56
HDLBP-236ENST00000477477 GFPT2O94808 682 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 PAK4O96013 591 aaPredicted RBP11.57□□□□□ -0.56
HDLBP-236ENST00000477477 MT-CO3P00414 261 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 ALPPL2P10696 532 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 CKMT1AP12532 417 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 RHOQP17081 205 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 ITPKBP27987 946 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 SDC4P31431 198 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 ADRA1BP35368 520 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 MAPKAPK2P49137 400 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 FMO1Q01740 532 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 CDR2Q01850 454 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 CDO1Q16878 200 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 C15orf59Q2T9L4 293 aaPredicted RBP11.57□□□□□ -0.56
HDLBP-236ENST00000477477 ARL13BQ3SXY8 428 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 CCDC14Q49A88 953 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 RWDD4Q6NW29 188 aaKnown RBP11.57□□□□□ -0.56
HDLBP-236ENST00000477477 ZSCAN30Q86W11 494 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 NLRP14Q86W24 1093 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 DCP2Q8IU60 420 aaKnown RBP11.57□□□□□ -0.56
HDLBP-236ENST00000477477 PLPP6Q8IY26 295 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 RXFP2Q8WXD0 754 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 BAP1Q92560 729 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 ARHGEF2Q92974 986 aaKnown RBP11.57□□□□□ -0.56
HDLBP-236ENST00000477477 FEM1CQ96JP0 617 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 BMFQ96LC9 184 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 C11orf70Q9BRQ4 267 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 SLC17A9Q9BYT1 436 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 OSBPL2Q9H1P3 480 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 RETREG1Q9H6L5 497 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 ZDHHC6Q9H6R6 413 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 NDFIP2Q9NV92 336 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 TMEM248Q9NWD8 314 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 DNAJC28Q9NX36 388 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 NLGN3Q9NZ94 848 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 HECAQ9UBI9 543 aaPredicted RBP11.57□□□□□ -0.56
HDLBP-236ENST00000477477 OR12D3Q9UGF7 316 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 HS3ST3A1Q9Y663 406 aa11.57□□□□□ -0.56
HDLBP-236ENST00000477477 POM121BA6NF01 834 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 NEMP2A6NFY4 417 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 C2CD4BA6NLJ0 364 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 FAM72CH0Y354 149 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 SCAMP1O15126 338 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 RAD51BO15315 384 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 RRP8O43159 456 aaKnown RBP11.56□□□□□ -0.56
HDLBP-236ENST00000477477 BRINP1O60477 761 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 LRIG2O94898 1065 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 CHRNB2P17787 502 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 GKP32189 559 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 SOX5P35711 763 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 ABL2P42684 1182 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 PTPN9P43378 593 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 RABIFP47224 123 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 KLK7P49862 253 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 GSCP56915 257 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-236ENST00000477477 JAM2P57087 298 aa11.56□□□□□ -0.56
HDLBP-236ENST00000477477 GEMIN4P57678 1058 aaKnown RBP11.56□□□□□ -0.56
HDLBP-236ENST00000477477 POLR2FP61218 127 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms