RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 THADAQ6YHU6 1953 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 PLXND1Q9Y4D7 1925 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 APOC4-APOC2K7ER74 178 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 CEP104O60308 925 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 JCHAINP01591 159 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 APOC2P02655 101 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 SP9P0CG40 484 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 CCNCP24863 283 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 CLCN6P51797 869 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 CCNHP51946 323 aaPredicted RBP16.13■□□□□ 0.17
COPS3-207ENST00000477299 MAXP61244 160 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 RHOAP61586 193 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 STARD3Q14849 445 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 SIX1Q15475 284 aaPredicted RBP16.13■□□□□ 0.17
COPS3-207ENST00000477299 INO80DQ53TQ3 878 aaPredicted RBP16.13■□□□□ 0.17
COPS3-207ENST00000477299 CCDC181Q5TID7 509 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 KIAA1324Q6UXG2 1013 aaKnown RBP16.13■□□□□ 0.17
COPS3-207ENST00000477299 RASSF3Q86WH2 238 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 CCDC13Q8IYE1 715 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 RYBPQ8N488 228 aaPredicted RBP16.13■□□□□ 0.17
COPS3-207ENST00000477299 ATG4AQ8WYN0 398 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 P3H4Q92791 437 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 HDAC11Q96DB2 347 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 RSPH9Q9H1X1 276 aaPredicted RBP16.13■□□□□ 0.17
COPS3-207ENST00000477299 CARD9Q9H257 536 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 PRDM16Q9HAZ2 1276 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 NT5MQ9NPB1 228 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 HECAQ9UBI9 543 aaPredicted RBP16.13■□□□□ 0.17
COPS3-207ENST00000477299 WASF2Q9Y6W5 498 aa16.13■□□□□ 0.17
COPS3-207ENST00000477299 MCF2LO15068 1137 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 MATN3O15232 486 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 MID1O15344 667 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 TJP3O95049 919 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 APBB3O95704 486 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 CHRNA3P32297 505 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 PSMD8P48556 350 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 NR2C2P49116 596 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 PDK1Q15118 436 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 PRKD1Q15139 912 aaPredicted RBP16.12■□□□□ 0.17
COPS3-207ENST00000477299 NOMO1Q15155 1222 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 MYLK3Q32MK0 819 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 ARSIQ5FYB1 569 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 SEL1L2Q5TEA6 688 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 TMCO4Q5TGY1 634 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 CAMKK1Q8N5S9 505 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 PCDH20Q8N6Y1 951 aaKnown RBP16.12■□□□□ 0.17
COPS3-207ENST00000477299 CNTD1Q8N815 330 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 GRIN3AQ8TCU5 1115 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 C1orf54Q8WWF1 131 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 MAML1Q92585 1016 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 ISG20Q96AZ6 181 aaKnown RBP16.12■□□□□ 0.17
COPS3-207ENST00000477299 OSBPL9Q96SU4 736 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 CEP44Q9C0F1 390 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 RBM22Q9NW64 420 aaKnown RBP eCLIP16.12■□□□□ 0.17
COPS3-207ENST00000477299 SEPT10Q9P0V9 454 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 BCCIPQ9P287 314 aaKnown RBP eCLIP16.12■□□□□ 0.17
COPS3-207ENST00000477299 SERGEFQ9UGK8 458 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 PPM1HQ9ULR3 514 aa16.12■□□□□ 0.17
COPS3-207ENST00000477299 SPAG17Q6Q759 2223 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 LRRK1Q38SD2 2015 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 CXorf51AA0A1B0GTR3 108 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 H7C0C1 242 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 KRIT1O00522 736 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 IL1BP01584 269 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 FGGP02679 453 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 HLA-DQB2P05538 268 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 CCNB1P14635 433 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 MX2P20592 715 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 RBL1P28749 1068 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 CETN2P41208 172 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 MMP13P45452 471 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 ATP5OP48047 213 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 GEMIN4P57678 1058 aaKnown RBP16.11■□□□□ 0.17
COPS3-207ENST00000477299 EIF3EP60228 445 aaKnown RBP16.11■□□□□ 0.17
COPS3-207ENST00000477299 WASHC5Q12768 1159 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 HS1BP3Q53T59 392 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 MARC1Q5VT66 337 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 SRLQ86TD4 932 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 AADATQ8N5Z0 425 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 TEX26Q8N6G2 289 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 OR2AP1Q8NGE2 309 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 PIP4K2CQ8TBX8 421 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 OR8D1Q8WZ84 308 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 NELL1Q92832 810 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 ARRDC3Q96B67 414 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 SIPA1Q96FS4 1042 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 ZNF599Q96NL3 588 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 IL12RB2Q99665 862 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 CINPQ9BW66 212 aaPredicted RBP16.11■□□□□ 0.17
COPS3-207ENST00000477299 ZDHHC6Q9H6R6 413 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 FBXO4Q9UKT5 387 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 SNX12Q9UMY4 172 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 CYP8B1Q9UNU6 501 aa16.11■□□□□ 0.17
COPS3-207ENST00000477299 GON4LQ3T8J9 2241 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 F5H423 210 aaPredicted RBP16.1■□□□□ 0.17
COPS3-207ENST00000477299 AXIN1O15169 862 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 LEFTY1O75610 366 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 PIGNO95427 931 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 GSRP00390 522 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 RBP3P10745 1247 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms