RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ANKRD63C9JTQ0 380 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 KPNA4O00629 521 aaPredicted RBP18.79■□□□□ 0.6
VARS2-209ENST00000477288 DCXO43602 365 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 ABCG1P45844 678 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 PTENP60484 403 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 ILF2Q12905 390 aaKnown RBP18.79■□□□□ 0.6
VARS2-209ENST00000477288 ZDHHC13Q8IUH4 622 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 COPS5Q92905 334 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 UROC1Q96N76 676 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 MLPHQ9BV36 600 aaPredicted RBP18.79■□□□□ 0.6
VARS2-209ENST00000477288 IDH3BO43837 385 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 IL1BP01584 269 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 PECAM1P16284 738 aaPredicted RBP18.79■□□□□ 0.6
VARS2-209ENST00000477288 PSMD4P55036 377 aaKnown RBP18.79■□□□□ 0.6
VARS2-209ENST00000477288 PKNOX1P55347 436 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 OR52L1Q8NGH7 329 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 GNPTGQ9UJJ9 305 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 AP3D1O14617 1153 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 CD3EAPO15446 510 aaKnown RBP18.78■□□□□ 0.6
VARS2-209ENST00000477288 STX11O75558 287 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 PTPRAP18433 802 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 MRPS6P82932 125 aaKnown RBP18.78■□□□□ 0.6
VARS2-209ENST00000477288 IRF8Q02556 426 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 FAAP100Q0VG06 881 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 IKBIPQ70UQ0 350 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 SELENOMQ8WWX9 145 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 TRIM63Q969Q1 353 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 TM6SF2Q9BZW4 377 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 OR12D3Q9UGF7 316 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 TNFSF13BQ9Y275 285 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 MYRFQ9Y2G1 1151 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 GLI1P08151 1106 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 SMIM10L2AP0DMW4 78 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 SMIM10L2BP0DMW5 78 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 RPL4P36578 427 aaKnown RBP18.78■□□□□ 0.6
VARS2-209ENST00000477288 GCNT1Q02742 428 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 CREMQ03060 361 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 KCTD21Q4G0X4 260 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 FAM171BQ6P995 826 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 DHRSXQ8N5I4 330 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 LACRTQ9GZZ8 138 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 DNPEPQ9ULA0 475 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 OR10H1Q9Y4A9 318 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 ZMYM2Q9UBW7 1377 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 PRG2P13727 222 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 ZNF37AP17032 561 aaPredicted RBP18.78■□□□□ 0.6
VARS2-209ENST00000477288 HNF4AP41235 474 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 RBM23Q86U06 439 aaKnown RBP18.78■□□□□ 0.6
VARS2-209ENST00000477288 GRIP2Q9C0E4 1043 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 EHD3Q9NZN3 535 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 RCVRNP35243 200 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 NDUFV1P49821 464 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 SRSF11Q05519 484 aaKnown RBP18.78■□□□□ 0.6
VARS2-209ENST00000477288 SLC41A1Q8IVJ1 513 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 MYOCQ99972 504 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 SLC4A5Q9BY07 1137 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 ALG9Q9H6U8 611 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 CMTM6Q9NX76 183 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 MRPS7Q9Y2R9 242 aaKnown RBP18.78■□□□□ 0.6
VARS2-209ENST00000477288 MGRN1O60291 552 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 ANXA5P08758 320 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 ME2P23368 584 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 LRPAP1P30533 357 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 IDH2P48735 452 aaKnown RBP18.78■□□□□ 0.6
VARS2-209ENST00000477288 PFKFB4Q16877 469 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 PAPD7Q5XG87 772 aaKnown RBP18.78■□□□□ 0.6
VARS2-209ENST00000477288 CEP68Q76N32 757 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 EIF3MQ7L2H7 374 aaKnown RBP18.78■□□□□ 0.6
VARS2-209ENST00000477288 TTC7BQ86TV6 843 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 TINF2Q9BSI4 451 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 C9orf16Q9BUW7 83 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 IL17RBQ9NRM6 502 aa18.78■□□□□ 0.6
VARS2-209ENST00000477288 CELF3Q5SZQ8 465 aaKnown RBP18.77■□□□□ 0.6
VARS2-209ENST00000477288 EXOC3L1Q86VI1 746 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 RERGQ96A58 199 aaPredicted RBP18.77■□□□□ 0.6
VARS2-209ENST00000477288 ZNF304Q9HCX3 659 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 KCNQ5Q9NR82 932 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 MAT2BQ9NZL9 334 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 PSME2Q9UL46 239 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 SALL3Q9BXA9 1300 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 FGF10O15520 208 aaPredicted RBP18.77■□□□□ 0.6
VARS2-209ENST00000477288 RPA3P35244 121 aaPredicted RBP18.77■□□□□ 0.6
VARS2-209ENST00000477288 RPL21P46778 160 aaKnown RBP18.77■□□□□ 0.6
VARS2-209ENST00000477288 C16orf46Q6P387 395 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 PCDH20Q8N6Y1 951 aaKnown RBP18.77■□□□□ 0.6
VARS2-209ENST00000477288 VCPIP1Q96JH7 1222 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 VAT1Q99536 393 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 NRCAMQ92823 1304 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 C21orf59P57076 290 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 ALG11Q2TAA5 492 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 FAM124AQ86V42 546 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 KLHL23Q8NBE8 558 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 LPPQ93052 612 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 WNT8BQ93098 351 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 RACGAP1Q9H0H5 632 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 SLC27A5Q9Y2P5 690 aa18.77■□□□□ 0.6
VARS2-209ENST00000477288 MSCO60682 206 aa18.77■□□□□ 0.59
VARS2-209ENST00000477288 TNFRSF21O75509 655 aa18.77■□□□□ 0.59
VARS2-209ENST00000477288 MYBPC1Q00872 1141 aa18.77■□□□□ 0.59
VARS2-209ENST00000477288 FAM187BQ17R55 369 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms