RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 DLGAP2Q9P1A6 1054 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 PHF24Q9UPV7 400 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 NYNRINQ9P2P1 1898 aaKnown RBP13.6□□□□□ -0.23
HDAC7-221ENST00000477203 GREB1Q4ZG55 1949 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 A0A0D9SEW6 157 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 ITM2AO43736 263 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 CCL5P13501 91 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 HCAR3P49019 387 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 CDK16Q00536 496 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 FAM219BQ5XKK7 198 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 TMEM154Q6P9G4 183 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 DENND1CQ8IV53 801 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 RTL3Q8N8U3 475 aaKnown RBP13.59□□□□□ -0.23
HDAC7-221ENST00000477203 C10orf82Q8WW14 230 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 TBL1YQ9BQ87 522 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 TMEM120AQ9BXJ8 343 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 FETUBQ9UGM5 382 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 STARD13Q9Y3M8 1113 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 ZCWPW2A0A1B0GU75 182 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 GOLGA8CPA6NN73 597 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 AURKAO14965 403 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 TSHRP16473 764 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 GLDCP23378 1020 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 NIPAL4Q0D2K0 466 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 PLD1Q13393 1074 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 BRMS1LQ5PSV4 323 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 SLC43A3Q8NBI5 491 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 HAPLN3Q96S86 360 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 TRIM55Q9BYV6 548 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 RXFP1Q9HBX9 757 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 TLR8Q9NR97 1041 aaKnown RBP13.59□□□□□ -0.23
HDAC7-221ENST00000477203 SNX15Q9NRS6 342 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 USH1CQ9Y6N9 552 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 ALDH3A1P30838 453 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 ARFIP2P53365 341 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 RCN2Q14257 317 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 OR7D4Q8NG98 312 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 RILPQ96NA2 401 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 NDNQ99608 321 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 TRPC7Q9HCX4 862 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 CASS4Q9NQ75 786 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
HDAC7-221ENST00000477203 ZFP69BQ9UJL9 534 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 KCTD3Q9Y597 815 aa13.59□□□□□ -0.23
HDAC7-221ENST00000477203 OR51F1A6NGY5 319 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 MLNP12872 115 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 CCR10P46092 362 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 CDK7P50613 346 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 COG7P83436 770 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 CDH17Q12864 832 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 MPP3Q13368 585 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 RASA2Q15283 850 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 KCTD11Q693B1 232 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 MYLK4Q86YV6 388 aaPredicted RBP13.58□□□□□ -0.24
HDAC7-221ENST00000477203 C10orf107Q8IVU9 208 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 OXCT2Q9BYC2 517 aaPredicted RBP13.58□□□□□ -0.24
HDAC7-221ENST00000477203 TRHDEQ9UKU6 1024 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 TLR6Q9Y2C9 796 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 SQORQ9Y6N5 450 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 FRMPD3Q5JV73 1810 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 SYN3O14994 580 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 SEC24AO95486 1093 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 TPP2P29144 1249 aaPredicted RBP13.58□□□□□ -0.24
HDAC7-221ENST00000477203 GP5P40197 560 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 WNT3AP56704 352 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 ITGA9Q13797 1035 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 IHHQ14623 411 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 GRM3Q14832 879 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 NAPEPLDQ6IQ20 393 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 SLC41A1Q8IVJ1 513 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 FAM81AQ8TBF8 368 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 SCYL1Q96KG9 808 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 UBE2OQ9C0C9 1292 aaKnown RBP13.58□□□□□ -0.24
HDAC7-221ENST00000477203 ZYG11BQ9C0D3 744 aa13.58□□□□□ -0.24
HDAC7-221ENST00000477203 SUDS3Q9H7L9 328 aaPredicted RBP13.58□□□□□ -0.24
HDAC7-221ENST00000477203 MATN3O15232 486 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 LUC7L3O95232 432 aaKnown RBP13.57□□□□□ -0.24
HDAC7-221ENST00000477203 ALADP13716 330 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 GPR17Q13304 367 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 CUL3Q13618 768 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 POLD3Q15054 466 aaPredicted RBP13.57□□□□□ -0.24
HDAC7-221ENST00000477203 PTPRRQ15256 657 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 VWA5B1Q5TIE3 1220 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 PTAR1Q7Z6K3 402 aaPredicted RBP13.57□□□□□ -0.24
HDAC7-221ENST00000477203 OR6P1Q8NGX9 317 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 WBP2Q969T9 261 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 C8orf48Q96LL4 319 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 VN1R3Q9BXE9 311 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 EIF2B3Q9NR50 452 aaKnown RBP13.57□□□□□ -0.24
HDAC7-221ENST00000477203 ZNF180Q9UJW8 692 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 EMCNQ9ULC0 261 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 SLC12A4Q9UP95 1085 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 MTF2Q9Y483 593 aaPredicted RBP13.57□□□□□ -0.24
HDAC7-221ENST00000477203 MYOFQ9NZM1 2061 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 A0A096LPK6 155 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 A6NHS1 94 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 SLC38A8A6NNN8 435 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 FGFR3P22607 806 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 CCND1P24385 295 aa13.57□□□□□ -0.24
HDAC7-221ENST00000477203 ALDH18A1P54886 795 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms