RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 LEFTY1O75610 366 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 MTA2O94776 668 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 FSBPO95073 299 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 LCA5LO95447 670 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 GSRP00390 522 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 SYPP08247 313 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 KRT7P08729 469 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 TBC1D3HP0C7X1 549 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 MAN1A1P33908 653 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 PAPOLAP51003 745 aaKnown RBP13.67□□□□□ -0.22
ACTN4-205ENST00000477174 METAP1P53582 386 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 ADPRHP54922 357 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 SNRPD1P62314 119 aaKnown RBP13.67□□□□□ -0.22
ACTN4-205ENST00000477174 CNTN1Q12860 1018 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 MYLK3Q32MK0 819 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 TBC1D3GQ6DHY5 549 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 TXNRD3NBQ6F5E7 133 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 TBC1D3CQ6IPX1 549 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 NCEH1Q6PIU2 408 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 TBC1D3Q8IZP1 549 aaPredicted RBP13.67□□□□□ -0.22
ACTN4-205ENST00000477174 CHST14Q8NCH0 376 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 OR2AP1Q8NGE2 309 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 FAM71BQ8TC56 605 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 PPP1R16AQ96I34 528 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 CSPG4P5Q96PW8 444 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 EDEM2Q9BV94 578 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 HDAC8Q9BY41 377 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 ZDHHC5Q9C0B5 715 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 SLC39A8Q9C0K1 460 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 MIR1-1HGQ9H1L0 117 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 DYRK4Q9NR20 520 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 ACTL7AQ9Y615 435 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 RALGAPA1Q6GYQ0 2036 aa13.67□□□□□ -0.22
ACTN4-205ENST00000477174 DCHS1Q96JQ0 3298 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 ATXN2Q99700 1313 aaKnown RBP13.66□□□□□ -0.22
ACTN4-205ENST00000477174 KPNA3O00505 521 aaPredicted RBP13.66□□□□□ -0.22
ACTN4-205ENST00000477174 ARHGAP33O14559 1287 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 CDX4O14627 284 aaPredicted RBP13.66□□□□□ -0.22
ACTN4-205ENST00000477174 PLRG1O43660 514 aaKnown RBP13.66□□□□□ -0.22
ACTN4-205ENST00000477174 PRAMEF11O60813 436 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 TMCC1O94876 653 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 IGHV4-34P06331 123 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 ENGP17813 658 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 IL4RP24394 825 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 AFF3P51826 1226 aaKnown RBP13.66□□□□□ -0.22
ACTN4-205ENST00000477174 CCNHP51946 323 aaPredicted RBP13.66□□□□□ -0.22
ACTN4-205ENST00000477174 PDK2Q15119 407 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 AGBL4Q5VU57 503 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 NEK5Q6P3R8 708 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 LEKR1Q6ZMV7 388 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 ERN2Q76MJ5 926 aaKnown RBP13.66□□□□□ -0.22
ACTN4-205ENST00000477174 TMTC1Q8IUR5 882 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 MAP7D3Q8IWC1 876 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 RFFLQ8WZ73 363 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 SNX19Q92543 992 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 TSC1Q92574 1164 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 CELF6Q96J87 481 aaKnown RBP13.66□□□□□ -0.22
ACTN4-205ENST00000477174 TM6SF2Q9BZW4 377 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 PCDH18Q9HCL0 1135 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 TMEM9BQ9NQ34 198 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 MFHAS1Q9Y4C4 1052 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 WASF2Q9Y6W5 498 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 NUMA1Q14980 2115 aa13.66□□□□□ -0.22
ACTN4-205ENST00000477174 A0A1W2PPC4 97 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 C4orf47A7E2U8 309 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 J3KR12 359 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 TM4SF5O14894 197 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 LATO43561 262 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 FECHP22830 423 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 AMPD1P23109 780 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 ITGB7P26010 798 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 CYLC1P35663 651 aaPredicted RBP13.65□□□□□ -0.22
ACTN4-205ENST00000477174 NUDT1P36639 197 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 MAGEA1P43355 309 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 ARSEP51690 589 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 ATXN3P54252 364 aaPredicted RBP13.65□□□□□ -0.22
ACTN4-205ENST00000477174 CDH6P55285 790 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 RACK1P63244 317 aaKnown RBP13.65□□□□□ -0.22
ACTN4-205ENST00000477174 RAD51Q06609 339 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 IL10RBQ08334 325 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 KRT81Q14533 505 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 MESDQ14696 234 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 RFTN1Q14699 578 aaPredicted RBP13.65□□□□□ -0.22
ACTN4-205ENST00000477174 CYTH1Q15438 398 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 SPA17Q15506 151 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 POM121L1PQ3SYA9 428 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 PIP5KL1Q5T9C9 394 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 TMCO3Q6UWJ1 677 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 ARHGAP12Q8IWW6 846 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 RYBPQ8N488 228 aaPredicted RBP13.65□□□□□ -0.22
ACTN4-205ENST00000477174 ZCCHC9Q8N567 271 aaKnown RBP13.65□□□□□ -0.22
ACTN4-205ENST00000477174 KCTD6Q8NC69 237 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 GRIN3AQ8TCU5 1115 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 GDAP1L1Q96MZ0 367 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 OSBPL1AQ9BXW6 950 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 PDFQ9HBH1 243 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 PREBQ9HCU5 417 aa13.65□□□□□ -0.22
ACTN4-205ENST00000477174 LUC7LQ9NQ29 371 aaKnown RBP13.65□□□□□ -0.22
ACTN4-205ENST00000477174 UBA2Q9UBT2 640 aaPredicted RBP13.65□□□□□ -0.22
ACTN4-205ENST00000477174 NUP205Q92621 2012 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms