RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 SLC39A8Q9C0K1 460 aa12.5□□□□□ -0.41
PRKD3-209ENST00000477132 ZWILCHQ9H900 591 aa12.5□□□□□ -0.41
PRKD3-209ENST00000477132 NHEJ1Q9H9Q4 299 aaPredicted RBP12.5□□□□□ -0.41
PRKD3-209ENST00000477132 PDFQ9HBH1 243 aa12.5□□□□□ -0.41
PRKD3-209ENST00000477132 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
PRKD3-209ENST00000477132 CWC15Q9P013 229 aaKnown RBP12.5□□□□□ -0.41
PRKD3-209ENST00000477132 SUSD2Q9UGT4 822 aa12.5□□□□□ -0.41
PRKD3-209ENST00000477132 IL36AQ9UHA7 158 aa12.5□□□□□ -0.41
PRKD3-209ENST00000477132 CXorf51AA0A1B0GTR3 108 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 EIF3CLB5ME19 914 aaKnown RBP12.49□□□□□ -0.41
PRKD3-209ENST00000477132 AKR1B15C9JRZ8 316 aaPredicted RBP12.49□□□□□ -0.41
PRKD3-209ENST00000477132 KPNA3O00505 521 aaPredicted RBP12.49□□□□□ -0.41
PRKD3-209ENST00000477132 ARHGAP33O14559 1287 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 WNT9AO14904 365 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 LEFTY1O75610 366 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 TMCC1O94876 653 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 GNSP15586 552 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 CD27P26842 260 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 HTR7P34969 479 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 DNA2P51530 1060 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 YBEYP58557 167 aaPredicted RBP12.49□□□□□ -0.41
PRKD3-209ENST00000477132 GSE1Q14687 1217 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 PARP15Q460N3 678 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 CARD16Q5EG05 197 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 ARSIQ5FYB1 569 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 ATXN7L2Q5T6C5 722 aaPredicted RBP12.49□□□□□ -0.41
PRKD3-209ENST00000477132 FAM46CQ5VWP2 391 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 AFMIDQ63HM1 303 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 RABEPKQ7Z6M1 372 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 ZNF354CQ86Y25 554 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 PSTKQ8IV42 348 aaKnown RBP12.49□□□□□ -0.41
PRKD3-209ENST00000477132 MINDY1Q8N5J2 469 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 TMIEQ8NEW7 156 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 HSPH1Q92598 858 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 CCDC114Q96M63 670 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 SLC6A18Q96N87 628 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 EIF3CQ99613 913 aaKnown RBP12.49□□□□□ -0.41
PRKD3-209ENST00000477132 DEF6Q9H4E7 631 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 TM9SF3Q9HD45 589 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.49□□□□□ -0.41
PRKD3-209ENST00000477132 IP6K2Q9UHH9 426 aa12.49□□□□□ -0.41
PRKD3-209ENST00000477132 A0A1B0GVT2 93 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 A0A1W2PPC4 97 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 LRRC72A6NJI9 287 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 J3KR12 359 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 SLC7A4O43246 635 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 BUB1O43683 1085 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 AKR1B10O60218 316 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 GJB3O75712 270 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 PRNPP04156 253 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 CD48P09326 243 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 TPM1P09493 284 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 H2AFZP0C0S5 128 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 TMEM253P0C7T8 217 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 RECQLP46063 649 aaPredicted RBP12.48□□□□□ -0.41
PRKD3-209ENST00000477132 CSNK1EP49674 416 aaKnown RBP12.48□□□□□ -0.41
PRKD3-209ENST00000477132 ZNF75DP51815 510 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 TAS2R40P59535 323 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 SFSWAPQ12872 951 aaKnown RBP12.48□□□□□ -0.41
PRKD3-209ENST00000477132 CYTH1Q15438 398 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 UAP1L1Q3KQV9 507 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 ARHGAP36Q6ZRI8 547 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 H2AFVQ71UI9 128 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 ERMP1Q7Z2K6 904 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 POLNQ7Z5Q5 900 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 CNGA4Q8IV77 575 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 OR2AP1Q8NGE2 309 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 CTNNBL1Q8WYA6 563 aaPredicted RBP12.48□□□□□ -0.41
PRKD3-209ENST00000477132 ISG20Q96AZ6 181 aaKnown RBP12.48□□□□□ -0.41
PRKD3-209ENST00000477132 HEPHQ9BQS7 1158 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 ZDHHC6Q9H6R6 413 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 IL21RQ9HBE5 538 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 PCDH18Q9HCL0 1135 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 ETNK2Q9NVF9 386 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 ZNHIT6Q9NWK9 470 aaKnown RBP12.48□□□□□ -0.41
PRKD3-209ENST00000477132 CTTNBP2NLQ9P2B4 639 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 HECAQ9UBI9 543 aaPredicted RBP12.48□□□□□ -0.41
PRKD3-209ENST00000477132 LHX3Q9UBR4 397 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 HPCAL4Q9UM19 191 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 LRRK1Q38SD2 2015 aa12.48□□□□□ -0.41
PRKD3-209ENST00000477132 TBC1D3DA0A087WVF3 549 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 TBC1D3IA0A087WXS9 549 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 TBC1D3EA0A087X179 549 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 TBC1D3KA0A087X1G2 549 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 TBC1D3FA6NER0 549 aaPredicted RBP12.47□□□□□ -0.41
PRKD3-209ENST00000477132 ZSCAN5CA6NGD5 496 aaPredicted RBP12.47□□□□□ -0.41
PRKD3-209ENST00000477132 TBC1D3LB9A6J9 549 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 MYO1FO00160 1098 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 LATO43561 262 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 PROSCO94903 275 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 GSRP00390 522 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 WNT1P04628 370 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 TBC1D3HP0C7X1 549 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 AMPD1P23109 780 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 MAT2AP31153 395 aaKnown RBP12.47□□□□□ -0.41
PRKD3-209ENST00000477132 HCAR3P49019 387 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 PAPOLAP51003 745 aaKnown RBP12.47□□□□□ -0.41
PRKD3-209ENST00000477132 CCR5P51681 352 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 ARSEP51690 589 aa12.47□□□□□ -0.41
PRKD3-209ENST00000477132 NDST2P52849 883 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms