RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 HMBOX1Q6NT76 420 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 GALNT18Q6P9A2 607 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 MACC1Q6ZN28 852 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 DSG4Q86SJ6 1040 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 MTDHQ86UE4 582 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 ARMC8Q8IUR7 673 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 TMEM126BQ8IUX1 230 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 SLC41A1Q8IVJ1 513 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 GALNT12Q8IXK2 581 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 EID3Q8N140 333 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 LINC00528Q8N1L1 170 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 ZNF366Q8N895 744 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 FNDC5Q8NAU1 212 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 FANCBQ8NB91 859 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 OR52N1Q8NH53 320 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 WDR48Q8TAF3 677 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 RAET1EQ8TD07 263 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 XAGE3Q8WTP9 111 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 ASZ1Q8WWH4 475 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 MYDGFQ969H8 173 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 FBXW5Q969U6 566 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 SLC10A4Q96EP9 437 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 PHACTR3Q96KR7 559 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 CNBD2Q96M20 576 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 TCEANC2Q96MN5 208 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 CLUHP3Q96NS8 147 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 WRNIP1Q96S55 665 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 CRB3Q9BUF7 120 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 EFHD1Q9BUP0 239 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 KIFC3Q9BVG8 833 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 KIFC1Q9BW19 673 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 FRMD8Q9BZ67 464 aaPredicted RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 OSBPL8Q9BZF1 889 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 TFB2MQ9H5Q4 396 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 IFT46Q9NQC8 304 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 KLHL11Q9NVR0 708 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 ZNF624Q9P2J8 865 aaPredicted RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 DNMT3BQ9UBC3 853 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 EIF3KQ9UBQ5 218 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 EXTL2Q9UBQ6 330 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 KLQ9UEF7 1012 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 ADAMTS6Q9UKP5 1117 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 CNOT11Q9UKZ1 510 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 DUSP12Q9UNI6 340 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 ENTPD4Q9Y227 616 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 INVSQ9Y283 1065 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 GDAQ9Y2T3 454 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 ACOT9Q9Y305 439 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 SNX24Q9Y343 169 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 IQGAP3Q86VI3 1631 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 ABCB11O95342 1321 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 SPHKAPQ2M3C7 1700 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 ARHGEF28Q8N1W1 1705 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 A0A1B0GUL6 1792 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 SYCP2Q9BX26 1530 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 LOC102724428A0A0B4J2F2 783 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 A0A0G2JMP0 313 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 HEATR9A2RTY3 570 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ARHGAP42A6NI28 874 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ARGFXA6NJG6 315 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 TRIM75PA6NK02 468 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 H3BMQ9 156 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 DEAF1O75398 565 aaPredicted RBP4.2□□□□□ -1.74
CD55-208ENST00000476590 GCATO75600 419 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 RFPL2O75678 378 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 KRT37O76014 449 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 CLPXO76031 633 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ALDH1A2O94788 518 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 SLITRK3O94933 977 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 CAMTA2O94983 1202 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 H6PDO95479 791 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 KRT1P04264 644 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 CAPNS1P04632 268 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 SRCP12931 536 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 BRAFP15056 766 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ITIH2P19823 946 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 IMPDH1P20839 514 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 DCKP27707 260 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 PIK3R1P27986 724 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 NMT1P30419 496 aaKnown RBP4.2□□□□□ -1.74
CD55-208ENST00000476590 FOXN2P32314 431 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 GJC1P36383 396 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ALDH1A3P47895 512 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 KCNJ5P48544 419 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 SERPINH1P50454 418 aaKnown RBP4.2□□□□□ -1.74
CD55-208ENST00000476590 KCNQ4P56696 695 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 SIK1P57059 783 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 MPP1Q00013 466 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 IL1RL1Q01638 556 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 PCDH1Q08174 1060 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 GALNT2Q10471 571 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 NR5A1Q13285 461 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 COTL1Q14019 142 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ZNF827Q17R98 1081 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 GEN1Q17RS7 908 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 GTDC1Q4AE62 458 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 CYP27C1Q4G0S4 372 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 AARDQ4LEZ3 155 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 YIF1BQ5BJH7 314 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 HES5Q5TA89 166 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms