RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ZNHIT2Q9UHR6 403 aa8.52□□□□□ -1.05
VAPB-205ENST00000476395 HES2Q9Y543 173 aa8.52□□□□□ -1.05
VAPB-205ENST00000476395 G3V2L1 256 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 STAU1O95793 577 aaKnown RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 PGK2P07205 417 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 ARSAP15289 507 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 ARF4P18085 180 aaPredicted RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 RPS12P25398 132 aaKnown RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 BMXP51813 675 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 TSPY1Q01534 308 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 TNFAIP1Q13829 316 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 FLOT2Q14254 428 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 STILQ15468 1287 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 RARS2Q5T160 578 aaKnown RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 ARTNQ5T4W7 220 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 GPR107Q5VW38 600 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 TMEM26Q6ZUK4 368 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 VASH1Q7L8A9 365 aaPredicted RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 ARCQ7LC44 396 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 SPNS2Q8IVW8 549 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 CHERPQ8IWX8 916 aaKnown RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 SLC15A4Q8N697 577 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 KIAA1958Q8N8K9 716 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 TBC1D15Q8TC07 691 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 DPF3Q92784 378 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 HERC2P3Q9BVR0 1158 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 NRBP2Q9NSY0 501 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 HOXC10Q9NYD6 342 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 GMPR2Q9P2T1 348 aaKnown RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 RAB26Q9ULW5 256 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 SLC45A1Q9Y2W3 748 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 FZD9O00144 591 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 NEMP1O14524 444 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 APOL1O14791 398 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 USP2O75604 605 aaPredicted RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 ZNF182P17025 639 aaPredicted RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 CKMT2P17540 419 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 GRIA3P42263 894 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 CCR10P46092 362 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 ALDH3B2P48448 385 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 HARS2P49590 506 aaKnown RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 PGGT1BP53609 377 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 C21orf59P57076 290 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 TBX4P57082 545 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 ZBTB17Q13105 803 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 ITGADQ13349 1161 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 CEACAM7Q14002 265 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 PDK2Q15119 407 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 Q3C1V9 767 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 AARS2Q5JTZ9 985 aaKnown RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 IL23RQ5VWK5 629 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 BORAQ6PGQ7 559 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 CLEC14AQ86T13 490 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 GPR180Q86V85 440 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 HACE1Q8IYU2 909 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 NAT16Q8N8M0 369 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 LRRC39Q96DD0 335 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 HPDLQ96IR7 371 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 CSPG4P5Q96PW8 444 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 LGMNQ99538 433 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 TMEM79Q9BSE2 394 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 ZNF385DQ9H6B1 395 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 PCDH12Q9NPG4 1184 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 XPNPEP3Q9NQH7 507 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 THAP1Q9NVV9 213 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 APOBEC2Q9Y235 224 aaKnown RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 GPC6Q9Y625 555 aaPredicted RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 IL18RAPO95256 599 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 KCNH1O95259 989 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 TNNC2P02585 160 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 COX4I1P13073 169 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 ZNF26P17031 533 aaPredicted RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 IGFBP6P24592 240 aaPredicted RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 SLC6A3Q01959 620 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 GOLGA7BQ2TAP0 167 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 USP41Q3LFD5 358 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 SLC9B1Q4ZJI4 515 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 N4BP2L1Q5TBK1 243 aaPredicted RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 EFCAB12Q6NXP0 572 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 PRR23BQ6ZRT6 265 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 PIWIL2Q8TC59 973 aaKnown RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 ZFPM2Q8WW38 1151 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 JADE3Q92613 823 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 THAP11Q96EK4 314 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 VPS50Q96JG6 964 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 HEXIM2Q96MH2 286 aaKnown RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 OR52B2Q96RD2 323 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 CIB1Q99828 191 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 GBA3Q9H227 469 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 TBC1D23Q9NUY8 699 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 GPRC5DQ9NZD1 345 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 NCKIPSDQ9NZQ3 722 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 ARIH1Q9Y4X5 557 aaPredicted RBP8.51□□□□□ -1.05
VAPB-205ENST00000476395 ST14Q9Y5Y6 855 aa8.51□□□□□ -1.05
VAPB-205ENST00000476395 KRT37O76014 449 aa8.5□□□□□ -1.05
VAPB-205ENST00000476395 CAPNS1P04632 268 aa8.5□□□□□ -1.05
VAPB-205ENST00000476395 YAP1P46937 504 aaKnown RBP8.5□□□□□ -1.05
VAPB-205ENST00000476395 PRKG1Q13976 671 aa8.5□□□□□ -1.05
VAPB-205ENST00000476395 ZBTB6Q15916 424 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms