RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ZNF605Q86T29 641 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 GPC2Q8N158 579 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 MAGEE2Q8TD90 523 aaPredicted RBP11.09□□□□□ -0.63
VAPB-204ENST00000475243 HIST1H2ACQ93077 130 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 SLC35C1Q96A29 364 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 TBCBQ99426 244 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 TMPRSS4Q9NRS4 437 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 NRCAMQ92823 1304 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 SIGLEC16A6NMB1 481 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 CYP4F2P78329 520 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 CYP4F3Q08477 520 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 ADRM1Q16186 407 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 HECTD3Q5T447 861 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 MOB2Q70IA6 237 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 CFAP52Q8N1V2 620 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 NWD1Q149M9 1564 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 H0Y858 1186 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 OR10H2O60403 315 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 NAGLUP54802 743 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 GRIK5Q16478 980 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 GCNT7Q6ZNI0 430 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 TMEM86AQ8N2M4 240 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 ZCCHC9Q8N567 271 aaKnown RBP11.09□□□□□ -0.63
VAPB-204ENST00000475243 BCLAF3A2AJT9 711 aaKnown RBP11.09□□□□□ -0.63
VAPB-204ENST00000475243 IDH2P48735 452 aaKnown RBP11.09□□□□□ -0.63
VAPB-204ENST00000475243 GNA13Q14344 377 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 TERB1Q8NA31 727 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 ACTRT2Q8TDY3 377 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 REEP1Q9H902 201 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 BLOC1S4Q9NUP1 217 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 TOR4AQ9NXH8 423 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 BTBD7Q9P203 1132 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 IRF6O14896 467 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 GOT1P17174 413 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 CDC25CP30307 473 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 PABPC1LQ4VXU2 614 aaKnown RBP11.09□□□□□ -0.63
VAPB-204ENST00000475243 NIPA1Q7RTP0 329 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 OR6K2Q8NGY2 324 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 MOSPD2Q8NHP6 518 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 ZNF671Q8TAW3 534 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 APBB2Q92870 758 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 TINF2Q9BSI4 451 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 C2orf49Q9BVC5 232 aaPredicted RBP11.09□□□□□ -0.63
VAPB-204ENST00000475243 BTRCQ9Y297 605 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 MRPS23Q9Y3D9 190 aaKnown RBP11.09□□□□□ -0.63
VAPB-204ENST00000475243 AFDNP55196 1824 aaKnown RBP11.09□□□□□ -0.63
VAPB-204ENST00000475243 NCOA3Q9Y6Q9 1424 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 GLRA2P23416 452 aa11.08□□□□□ -0.63
VAPB-204ENST00000475243 CYP2A13Q16696 494 aa11.08□□□□□ -0.63
VAPB-204ENST00000475243 ZNF276Q8N554 614 aa11.08□□□□□ -0.63
VAPB-204ENST00000475243 C19orf60Q96EN9 201 aa11.08□□□□□ -0.63
VAPB-204ENST00000475243 S100A13Q99584 98 aa11.08□□□□□ -0.63
VAPB-204ENST00000475243 SLC12A4Q9UP95 1085 aa11.08□□□□□ -0.63
VAPB-204ENST00000475243 TRUB2O95900 331 aaKnown RBP11.08□□□□□ -0.64
VAPB-204ENST00000475243 IFNGR2P38484 337 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 IRF8Q02556 426 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 SRSF11Q05519 484 aaKnown RBP11.08□□□□□ -0.64
VAPB-204ENST00000475243 SERPINA13PQ6UXR4 307 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 R3HCC1LQ7Z5L2 792 aaKnown RBP11.08□□□□□ -0.64
VAPB-204ENST00000475243 MAP4K3Q8IVH8 894 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 OSCP1Q8WVF1 389 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 CITO14578 2027 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 ZW10O43264 779 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 GMFGO60234 142 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 LRATO95237 230 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 SLC34A1Q06495 639 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 C1orf186Q6ZWK4 172 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 APTXQ7Z2E3 356 aaKnown RBP11.08□□□□□ -0.64
VAPB-204ENST00000475243 STK39Q9UEW8 545 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 GNPTGQ9UJJ9 305 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 ATXN2Q99700 1313 aaKnown RBP11.08□□□□□ -0.64
VAPB-204ENST00000475243 OAZ1P54368 228 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 PRKAA2P54646 552 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 PAGE2BQ5JRK9 111 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 STXBP5Q5T5C0 1151 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 FAM124AQ86V42 546 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 PARP8Q8N3A8 854 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 TSEN2Q8NCE0 465 aaKnown RBP11.08□□□□□ -0.64
VAPB-204ENST00000475243 CEP44Q9C0F1 390 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 ASAH2Q9NR71 780 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 MTA1Q13330 715 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 TNS4Q8IZW8 715 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 CENPIQ92674 756 aaPredicted RBP11.08□□□□□ -0.64
VAPB-204ENST00000475243 RMND5BQ96G75 393 aaPredicted RBP11.08□□□□□ -0.64
VAPB-204ENST00000475243 PPP1R16AQ96I34 528 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 TEKT5Q96M29 485 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 FAM237BA0A1B0GVD1 139 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 IL6P05231 212 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 GRIA3P42263 894 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.08□□□□□ -0.64
VAPB-204ENST00000475243 MTAPQ13126 283 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 CCNIQ14094 377 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 ACAP1Q15027 740 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 TMC5Q6UXY8 1006 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 KYAT3Q6YP21 454 aaKnown RBP11.08□□□□□ -0.64
VAPB-204ENST00000475243 KATNAL2Q8IYT4 538 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 OR52K2Q8NGK3 314 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 SLITRK2Q9H156 845 aa11.08□□□□□ -0.64
VAPB-204ENST00000475243 FARP2O94887 1054 aaPredicted RBP11.08□□□□□ -0.64
VAPB-204ENST00000475243 ANXA5P08758 320 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms