RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 DOCK4Q8N1I0 1966 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 CHD5Q8TDI0 1954 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 MYO7AQ13402 2215 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 GOLGA6BA6NDN3 693 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 DFFAO00273 331 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 RFXAPO00287 272 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 SLC9A3R1O14745 358 aaPredicted RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 SPAG6O75602 509 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 ANXA9O76027 345 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 PRAMEF12O95522 483 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 EPOP01588 193 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 HLA-DQB2P05538 268 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 RHOCP08134 193 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 MMP2P08253 660 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 NFKB1P19838 968 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 CES1P23141 567 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 GPX6P59796 221 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 BASP1P80723 227 aaKnown RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 SARNPP82979 210 aaKnown RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 SLC20A2Q08357 652 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 ZNF844Q08AG5 666 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 NSUN2Q08J23 767 aaKnown RBP eCLIP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 SLC10A7Q0GE19 358 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 MSLNQ13421 630 aaPredicted RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 FRG1Q14331 258 aaKnown RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 IHHQ14623 411 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 LBRQ14739 615 aaKnown RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 FASTKD3Q14CZ7 662 aaKnown RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 KYNUQ16719 465 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 CCDC38Q502W7 563 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 TCEAL5Q5H9L2 206 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 FSCBQ5H9T9 825 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 RALGPS1Q5JS13 557 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 UBAP2Q5T6F2 1119 aaKnown RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 MARC1Q5VT66 337 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 STEAP4Q687X5 459 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 DENND5AQ6IQ26 1287 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 ZNF449Q6P9G9 518 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 KDELC1Q6UW63 502 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 TMC5Q6UXY8 1006 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 RANBP10Q6VN20 620 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 CROCCP2Q86T23 111 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 PRPF39Q86UA1 669 aaKnown RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 TDRPQ86YL5 185 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 CCNJLQ8IV13 435 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 IGDCC3Q8IVU1 814 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 ARID3BQ8IVW6 561 aaPredicted RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 NPAS3Q8IXF0 933 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 PGBD5Q8N414 524 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 CELF5Q8N6W0 485 aaKnown RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 C12orf76Q8N812 135 aaPredicted RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 DCAF4L2Q8NA75 395 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 TDRD5Q8NAT2 981 aaKnown RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 ZSCAN1Q8NBB4 408 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 ARRDC2Q8TBH0 407 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 PPM1EQ8WY54 764 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 ACDQ96AP0 544 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 OXNAD1Q96HP4 312 aaPredicted RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 ASB16Q96NS5 453 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 AGAP3Q96P47 875 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 LRRC3BQ96PB8 259 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 MGME1Q9BQP7 344 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 FEM1AQ9BSK4 669 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 SLC2A11Q9BYW1 496 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 PPCSQ9HAB8 311 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 RBM22Q9NW64 420 aaKnown RBP eCLIP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 OGFRQ9NZT2 677 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 CLEC1BQ9P126 229 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 RSPH14Q9UHP6 348 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 PLAAQ9Y263 795 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 AAR2Q9Y312 384 aaKnown RBP6.73□□□□□ -1.33
ATG4A-207ENST00000474825 ATG2AQ2TAZ0 1938 aa6.73□□□□□ -1.33
ATG4A-207ENST00000474825 XIRP2A4UGR9 3374 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 LOC285095A0A1B0GVY8 99 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 MAGEB16A2A368 324 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 TYW5A2RUC4 315 aaKnown RBP6.72□□□□□ -1.33
ATG4A-207ENST00000474825 GOLGA6CA6NDK9 693 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 SDR42E2A6NKP2 422 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 E7EVH7 732 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 TRDMT1O14717 391 aaKnown RBP6.72□□□□□ -1.33
ATG4A-207ENST00000474825 HOXC11O43248 304 aaPredicted RBP6.72□□□□□ -1.33
ATG4A-207ENST00000474825 OPA1O60313 960 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 TSPAN3O60637 253 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 TBL1XO60907 577 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 FAM155BO75949 473 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 ALDH1A2O94788 518 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 SHBGP04278 402 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 GOLGA6DP0CG33 693 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 FSHRP23945 695 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 FCARP24071 287 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 PRKCHP24723 683 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 PSMA3P25788 255 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 GRIA1P42261 906 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 CSNK1DP48730 415 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 NPY2RP49146 381 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 GEMP55040 296 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 ARF5P84085 180 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 SKOR1P84550 965 aa6.72□□□□□ -1.33
ATG4A-207ENST00000474825 NIPAL4Q0D2K0 466 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms