RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 VCPIP1Q96JH7 1222 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 FAM81BQ96LP2 452 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 SPON2Q9BUD6 331 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 HDAC8Q9BY41 377 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 SLC17A9Q9BYT1 436 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 USP29Q9HBJ7 922 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 ANLNQ9NQW6 1124 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 TMPRSS4Q9NRS4 437 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 THSD1Q9NS62 852 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 ARHGEF38Q9NXL2 777 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 APEX2Q9UBZ4 518 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 IPO11Q9UI26 975 aaKnown RBP14.29□□□□□ -0.12
CCDC78-209ENST00000474647 STAP1Q9ULZ2 295 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 PCDHGC3Q9UN70 934 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 U3KQA8 63 aa14.29□□□□□ -0.12
CCDC78-209ENST00000474647 CAPN8A6NHC0 703 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 RAD51BO15315 384 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 DXOO77932 396 aaKnown RBP14.28□□□□□ -0.12
CCDC78-209ENST00000474647 PAK4O96013 591 aaPredicted RBP14.28□□□□□ -0.12
CCDC78-209ENST00000474647 ADRB3P13945 408 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 TGM2P21980 687 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 KRT9P35527 623 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 SNX16P57768 344 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 RPS21P63220 83 aaKnown RBP14.28□□□□□ -0.12
CCDC78-209ENST00000474647 PTK2Q05397 1052 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 DEUP1Q05D60 604 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 PDE1CQ14123 709 aaPredicted RBP14.28□□□□□ -0.12
CCDC78-209ENST00000474647 MORC3Q14149 939 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 LY6DQ14210 128 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 FZD2Q14332 565 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 ISXQ2M1V0 245 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 DEFB133Q30KQ1 61 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 PTPN20Q4JDL3 420 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 BRMS1LQ5PSV4 323 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 GUSBP11Q6P575 273 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 FOXR2Q6PJQ5 311 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 KYAT3Q6YP21 454 aaKnown RBP14.28□□□□□ -0.12
CCDC78-209ENST00000474647 EFL1Q7Z2Z2 1120 aaKnown RBP14.28□□□□□ -0.12
CCDC78-209ENST00000474647 SETD3Q86TU7 594 aaPredicted RBP14.28□□□□□ -0.12
CCDC78-209ENST00000474647 DCP2Q8IU60 420 aaKnown RBP14.28□□□□□ -0.12
CCDC78-209ENST00000474647 FAM181AQ8N9Y4 354 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 UNC13CQ8NB66 2214 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 FAM174AQ8TBP5 190 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 ATXN7L3BQ96GX2 97 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 BMFQ96LC9 184 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 ZDHHC6Q9H6R6 413 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 SYNDIG1Q9H7V2 258 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 ATP13A1Q9HD20 1204 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 ASCL3Q9NQ33 180 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 WDR70Q9NW82 654 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC78-209ENST00000474647 WASF2Q9Y6W5 498 aa14.28□□□□□ -0.12
CCDC78-209ENST00000474647 SPTY2D1-AS1A0A0U1RR47 76 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 I6L893 689 aaPredicted RBP14.27□□□□□ -0.13
CCDC78-209ENST00000474647 FPGTO14772 594 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 AQP9O43315 295 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 SRGAP2O75044 1071 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 FGFR1OPO95684 399 aaKnown RBP14.27□□□□□ -0.13
CCDC78-209ENST00000474647 PNMA6AP0CW24 399 aaPredicted RBP14.27□□□□□ -0.13
CCDC78-209ENST00000474647 NME1P15531 152 aaKnown RBP14.27□□□□□ -0.13
CCDC78-209ENST00000474647 JUNDP17535 347 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 ITGB7P26010 798 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 RBMS1P29558 406 aaKnown RBP14.27□□□□□ -0.13
CCDC78-209ENST00000474647 CXCR3P49682 368 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 SERPINH1P50454 418 aaKnown RBP14.27□□□□□ -0.13
CCDC78-209ENST00000474647 FGL2Q14314 439 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 DRAP1Q14919 205 aaPredicted RBP14.27□□□□□ -0.13
CCDC78-209ENST00000474647 RETSATQ6NUM9 610 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 GBP6Q6ZN66 633 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 ZNF683Q8IZ20 524 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 RYBPQ8N488 228 aaPredicted RBP14.27□□□□□ -0.13
CCDC78-209ENST00000474647 LMX1AQ8TE12 382 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 SHC3Q92529 594 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 FEM1CQ96JP0 617 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 TBCBQ99426 244 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 NPY6RQ99463 290 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 IL12RB2Q99665 862 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 DPH1Q9BZG8 443 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 SEMA4CQ9C0C4 833 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 PDCL3Q9H2J4 239 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 RRN3Q9NYV6 651 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 AJAP1Q9UKB5 411 aaPredicted RBP14.27□□□□□ -0.13
CCDC78-209ENST00000474647 FCF1Q9Y324 198 aaKnown RBP14.27□□□□□ -0.13
CCDC78-209ENST00000474647 PAXBP1Q9Y5B6 917 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 HS3ST3A1Q9Y663 406 aa14.27□□□□□ -0.13
CCDC78-209ENST00000474647 PYCARD-AS1I3L0S3 204 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 NEMP1O14524 444 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 CSF2P04141 144 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 L1CAMP32004 1257 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 RABIFP47224 123 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 CCNHP51946 323 aaPredicted RBP14.26□□□□□ -0.13
CCDC78-209ENST00000474647 VAC14Q08AM6 782 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 SGCGQ13326 291 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 EXOC3L4Q17RC7 722 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 FAM102AQ5T9C2 384 aaPredicted RBP14.26□□□□□ -0.13
CCDC78-209ENST00000474647 PARS2Q7L3T8 475 aaKnown RBP14.26□□□□□ -0.13
CCDC78-209ENST00000474647 SLC47A2Q86VL8 602 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 DRC7Q8IY82 874 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 RBFAQ8N0V3 343 aa14.26□□□□□ -0.13
CCDC78-209ENST00000474647 PCDH20Q8N6Y1 951 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms