RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 TPGS1Q6ZTW0 290 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 MIER3Q7Z3K6 550 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TAF8Q7Z7C8 310 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 VASH2Q86V25 355 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PRSS58Q8IYP2 241 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 MB21D1Q8N884 522 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZNF781Q8N8C0 355 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 OR8K5Q8NH50 307 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TCP10LQ8TDR4 215 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ACTRT2Q8TDY3 377 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SLC39A7Q92504 469 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TTC9Q92623 222 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 FBXO32Q969P5 355 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PHF21AQ96BD5 680 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ARHGEF26Q96DR7 871 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZBED3Q96IU2 234 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZIM3Q96PE6 472 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 DMRTA2Q96SC8 542 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 C1QTNF7Q9BXJ2 289 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 POLR1EQ9GZS1 481 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 C6orf62Q9GZU0 229 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 FAM192AQ9GZU8 254 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CLPBQ9H078 707 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 USP44Q9H0E7 712 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 IKZF4Q9H2S9 585 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 MARCH7Q9H992 704 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 NOD2Q9HC29 1040 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PCDH9Q9HC56 1237 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TMEM8AQ9HCN3 771 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 S100A14Q9HCY8 104 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 RAB20Q9NX57 234 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ELOVL2Q9NXB9 296 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 BTBD7Q9P203 1132 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 IL20RAQ9UHF4 553 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SERPINB13Q9UIV8 391 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 USP18Q9UMW8 372 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PCDHGC3Q9UN70 934 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 GPR55Q9Y2T6 319 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 IFT52Q9Y366 437 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 BAZ1AQ9NRL2 1556 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 HMX3A6NHT5 357 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 MITFO75030 526 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 KRT37O76014 449 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 GDF11O95390 407 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZBTB11O95625 1053 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 ATP6V1G2O95670 118 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 DHFRP00374 187 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 KRT19P08727 400 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 IGFBP1P08833 259 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 PLCG1P19174 1290 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 NFKB1P19838 968 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ITGALP20701 1170 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CALB2P22676 271 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CXCR2P25025 360 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CASP14P31944 242 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 NUDT1P36639 197 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 FNTBP49356 437 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CRYBB1P53674 252 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 ATP2C1P98194 919 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 GPS1Q13098 491 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 THOC5Q13769 683 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 GAS6Q14393 721 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZNF829Q3KNS6 432 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 TMEM119Q4V9L6 283 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 FBXO47Q5MNV8 452 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 IZUMO3Q5VZ72 239 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 NAA35Q5VZE5 725 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TIGD7Q6NT04 549 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 KLHL24Q6TFL4 600 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PADI6Q6TGC4 694 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 RUFY4Q6ZNE9 571 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 GPR141Q7Z602 305 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 MOGAT3Q86VF5 341 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZC3H18Q86VM9 953 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZFAND4Q86XD8 727 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TMC8Q8IU68 726 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 MCATQ8IVS2 390 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 IQCKQ8N0W5 287 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TTC29Q8NA56 475 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 KBTBD3Q8NAB2 608 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TMEM145Q8NBT3 493 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TSEN2Q8NCE0 465 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 SETD9Q8NE22 299 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 NELFBQ8WX92 580 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 AKAP1Q92667 903 aaKnown RBP eCLIP3.54□□□□□ -1.84
UBR3-208ENST00000474426 MR1Q95460 341 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ELMO3Q96BJ8 720 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 THUMPD3Q9BV44 507 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 L2HGDHQ9H9P8 463 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SIAEQ9HAT2 523 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 MCCC2Q9HCC0 563 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 MRPS30Q9NP92 439 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 TMEM140Q9NV12 185 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 MTMR4Q9NYA4 1195 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TAS2R10Q9NYW0 307 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CTSFQ9UBX1 484 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 POLLQ9UGP5 575 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 FAF1Q9UNN5 650 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 HBS1LQ9Y450 684 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 PUS1Q9Y606 427 aaKnown RBP eCLIP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms