RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 MAP6D1Q9H9H5 199 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 WASH6PQ9NQA3 447 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 ATP8A2Q9NTI2 1148 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 HIF1ANQ9NWT6 349 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 RRN3Q9NYV6 651 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 HCN3Q9P1Z3 774 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 PDP2Q9P2J9 529 aa3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 SRPRBQ9Y5M8 271 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-213ENST00000474240 CACNA1IQ9P0X4 2223 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 LOC102724159A0A0B4J2E5 919 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 RPS10-NUDT3A0A1W2PQS6 291 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 MS4A18H0YCH9 400 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 EYA2O00167 538 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 VWA5AO00534 786 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 CREB3O43889 395 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 CRYABP02511 175 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 ARSBP15848 533 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 RFC1P35251 1148 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 AVPR1AP37288 418 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 RFX2P48378 723 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 ROR2Q01974 943 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 TRAF2Q12933 501 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 PWP2Q15269 919 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 ALFQ53S48 1182 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 NEK10Q6ZWH5 1172 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 IRF2BP2Q7Z5L9 587 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 ADGRG6Q86SQ4 1221 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 PALB2Q86YC2 1186 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 CPXM2Q8N436 756 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 LRRC57Q8N9N7 239 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 KDM1BQ8NB78 822 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 LSM14AQ8ND56 463 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 SETD9Q8NE22 299 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 DNAAF1Q8NEP3 725 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 CMASQ8NFW8 434 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 ADAMTS15Q8TE58 950 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 SLC35F5Q8WV83 523 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 GPR63Q9BZJ6 419 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 CTDSP1Q9GZU7 261 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 EPHX3Q9H6B9 360 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 SIRT3Q9NTG7 399 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 BEX4Q9NWD9 120 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 TMEM160Q9NX00 188 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 PLK2Q9NYY3 685 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 IL36RNQ9UBH0 155 aa3.51□□□□□ -1.85
ECHDC1-213ENST00000474240 ARHGAP10A1A4S6 786 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 RRN3P2A6NIE6 340 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 FAM90A8PA6NJQ4 464 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 CD8B2A6NJW9 211 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 FAM90A7PA6NKC0 464 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 TTC36A6NLP5 189 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 FAM90A22PA8MWA6 464 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 FAM90A12PA8MX19 464 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 FAM90A23PA8MXZ1 464 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 FAM157AC9JC47 383 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 EBAG9O00559 213 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 TSPAN4O14817 238 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 CBX6O95503 412 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 FAM90A13PP0C7W8 464 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 FAM90A24PP0C7X0 464 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 PCNAP12004 261 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 CKMT1AP12532 417 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 PTPN2P17706 415 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 CHRNB2P17787 502 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 TNFRSF1BP20333 461 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 DPP6P42658 865 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 CENPAP49450 140 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 DSC1Q08554 894 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 CAMK1Q14012 370 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 NAA25Q14CX7 972 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 SLC18A3Q16572 532 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 EDRF1Q3B7T1 1238 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 LEXMQ3ZCV2 418 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 SYTL3Q4VX76 610 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 DNTTIP2Q5QJE6 756 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 ASPHD1Q5U4P2 390 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 TBC1D9BQ66K14 1250 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 AWAT2Q6E213 333 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 SLC16A12Q6ZSM3 486 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 RRM2BQ7LG56 351 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 CPOQ8IVL8 374 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 C11orf65Q8NCR3 313 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 C7orf57Q8NEG2 295 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 STAMQ92783 540 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 MAELQ96JY0 434 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 WDR77Q9BQA1 342 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 INTS2Q9H0H0 1204 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 ISCUQ9H1K1 167 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 MROH8Q9H579 483 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 NCKIPSDQ9NZQ3 722 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 CDH22Q9UJ99 828 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 TMEM98Q9Y2Y6 226 aa3.5□□□□□ -1.85
ECHDC1-213ENST00000474240 A0A1W2PPC1 479 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 C17orf100A8MU93 164 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 H0YGN5 161 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 STMND1H3BQB6 276 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 HSPB6O14558 160 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 INSIG1O15503 277 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 SPRY3O43610 288 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 ADAP00813 363 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms