RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 SPEM1Q8N4L4 309 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 ATPAF2Q8N5M1 289 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 C12orf50Q8NA57 414 aaPredicted RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 FAM131CQ96AQ9 280 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 ERLEC1Q96DZ1 483 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 PSKH2Q96QS6 385 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 MGME1Q9BQP7 344 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 AP1M1Q9BXS5 423 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 CEP41Q9BYV8 373 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 CEP44Q9C0F1 390 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 SLC6A17Q9H1V8 727 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 TNKS2Q9H2K2 1166 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 CD93Q9NPY3 652 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 DONSONQ9NYP3 566 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 NYNRINQ9P2P1 1898 aaKnown RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 MRPS17Q9Y2R5 130 aaKnown RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 WASF2Q9Y6W5 498 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 CACNA1HO95180 2353 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 ZSCAN5CA6NGD5 496 aaPredicted RBP10.53□□□□□ -0.72
CASC3-204ENST00000474190 HACD1B0YJ81 288 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 ESPNB1AK53 854 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 PGRMC1O00264 195 aaKnown RBP10.53□□□□□ -0.72
CASC3-204ENST00000474190 NPC1O15118 1278 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 NCAM2O15394 837 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 JCHAINP01591 159 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 RBP3P10745 1247 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 CCNB1P14635 433 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 MX2P20592 715 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 CASQ1P31415 396 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 KCNJ1P48048 391 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 EIF3EP60228 445 aaKnown RBP10.53□□□□□ -0.72
CASC3-204ENST00000474190 FOXK2Q01167 660 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 DMWDQ09019 674 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 RFTN1Q14699 578 aaPredicted RBP10.53□□□□□ -0.72
CASC3-204ENST00000474190 CCNG2Q16589 344 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 LONRF2Q1L5Z9 754 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 HSF5Q4G112 596 aaPredicted RBP10.53□□□□□ -0.72
CASC3-204ENST00000474190 PREPLQ4J6C6 727 aaPredicted RBP10.53□□□□□ -0.72
CASC3-204ENST00000474190 RETSATQ6NUM9 610 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 PRPF39Q86UA1 669 aaKnown RBP10.53□□□□□ -0.72
CASC3-204ENST00000474190 ZSWIM9Q86XI8 627 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 ZNF567Q8N184 647 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 ATP11CQ8NB49 1132 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 BRD8Q9H0E9 1235 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 PRMT8Q9NR22 394 aaPredicted RBP10.53□□□□□ -0.72
CASC3-204ENST00000474190 UBA2Q9UBT2 640 aaPredicted RBP10.53□□□□□ -0.72
CASC3-204ENST00000474190 EBF1Q9UH73 591 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 PPM1HQ9ULR3 514 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 NUP205Q92621 2012 aa10.53□□□□□ -0.72
CASC3-204ENST00000474190 TRAFD1O14545 582 aaPredicted RBP10.52□□□□□ -0.73
CASC3-204ENST00000474190 SPINT1O43278 529 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 GSRP00390 522 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 GABRG2P18507 467 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 MSNP26038 577 aaKnown RBP10.52□□□□□ -0.73
CASC3-204ENST00000474190 PTGIRP43119 386 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 CSNK1DP48730 415 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 MAXP61244 160 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 NSUN2Q08J23 767 aaKnown RBP eCLIP10.52□□□□□ -0.73
CASC3-204ENST00000474190 LRRC32Q14392 662 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 FNDC3BQ53EP0 1204 aaKnown RBP10.52□□□□□ -0.73
CASC3-204ENST00000474190 TEX44Q53QW1 395 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 NCEH1Q6PIU2 408 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 SERPINA13PQ6UXR4 307 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 RASSF3Q86WH2 238 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 CCDC117Q8IWD4 279 aaPredicted RBP10.52□□□□□ -0.73
CASC3-204ENST00000474190 CHPFQ8IZ52 775 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 STK40Q8N2I9 435 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 FBXL6Q8N531 539 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 PCDH20Q8N6Y1 951 aaKnown RBP10.52□□□□□ -0.73
CASC3-204ENST00000474190 CCNYQ8ND76 341 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 OR6K2Q8NGY2 324 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 UCMAQ8WVF2 138 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 TFB1MQ8WVM0 346 aaKnown RBP10.52□□□□□ -0.73
CASC3-204ENST00000474190 HTR3CQ8WXA8 447 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 CASKIN2Q8WXE0 1202 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 NELL1Q92832 810 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 PBXIP1Q96AQ6 731 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 OXNAD1Q96HP4 312 aaPredicted RBP10.52□□□□□ -0.73
CASC3-204ENST00000474190 EXOC2Q96KP1 924 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 CAPZA3Q96KX2 299 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 TEKT5Q96M29 485 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 TMEM121Q9BTD3 319 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 TM6SF2Q9BZW4 377 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 RSPH9Q9H1X1 276 aaPredicted RBP10.52□□□□□ -0.73
CASC3-204ENST00000474190 SP110Q9HB58 689 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 NOD2Q9HC29 1040 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 RBM22Q9NW64 420 aaKnown RBP eCLIP10.52□□□□□ -0.73
CASC3-204ENST00000474190 PLA2G4CQ9UP65 541 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 DRG1Q9Y295 367 aaKnown RBP10.52□□□□□ -0.73
CASC3-204ENST00000474190 MRFAP1Q9Y605 127 aa10.52□□□□□ -0.73
CASC3-204ENST00000474190 MYO18AQ92614 2054 aaKnown RBP10.51□□□□□ -0.73
CASC3-204ENST00000474190 GPR179Q6PRD1 2367 aa10.51□□□□□ -0.73
CASC3-204ENST00000474190 EDDM13A0A1B0GTR0 161 aa10.51□□□□□ -0.73
CASC3-204ENST00000474190 TARSL2A2RTX5 802 aaKnown RBP10.51□□□□□ -0.73
CASC3-204ENST00000474190 C5orf60A6NFR6 353 aa10.51□□□□□ -0.73
CASC3-204ENST00000474190 PPP1R12AO14974 1030 aaPredicted RBP10.51□□□□□ -0.73
CASC3-204ENST00000474190 MCF2LO15068 1137 aa10.51□□□□□ -0.73
CASC3-204ENST00000474190 TP73O15350 636 aa10.51□□□□□ -0.73
CASC3-204ENST00000474190 ZBTB24O43167 697 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms