RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 SH3PXD2BA1X283 911 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 PSMD12O00232 456 aaPredicted RBP6.2□□□□□ -1.42
HERC4-209ENST00000473533 SNAP91O60641 907 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 OR6B1O95007 311 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 BMP2P12643 396 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 IDO1P14902 403 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 CYP2B6P20813 491 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 ADORA2AP29274 412 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 FOXM1Q08050 763 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 CYTH1Q15438 398 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 KIZQ2M2Z5 673 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 C6orf52Q5T4I8 152 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 PPP4R4Q6NUP7 873 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 POTEHQ6S545 545 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 ZBTB49Q6ZSB9 765 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 CNTN4Q8IWV2 1026 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 TNS4Q8IZW8 715 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 BBS5Q8N3I7 341 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 MFSD2AQ8NA29 543 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 OR52K1Q8NGK4 314 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 KCTD13Q8WZ19 329 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 KHSRPQ92945 711 aaKnown RBP eCLIP6.2□□□□□ -1.427e-7■■■■□ 19.5
HERC4-209ENST00000473533 FAM149B1Q96BN6 582 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 WNK4Q96J92 1243 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 LGMNQ99538 433 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 TUBA1CQ9BQE3 449 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 KIFC1Q9BW19 673 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 MAGEE1Q9HCI5 957 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 MAN1C1Q9NR34 630 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 IARS2Q9NSE4 1012 aaKnown RBP6.2□□□□□ -1.42
HERC4-209ENST00000473533 SH3GLB1Q9Y371 365 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 NDUFAF1Q9Y375 327 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 MTF2Q9Y483 593 aaPredicted RBP6.2□□□□□ -1.42
HERC4-209ENST00000473533 FER1L6Q2WGJ9 1857 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 ZCWPW2A0A1B0GU75 182 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 GRID2O43424 1007 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 VPS4BO75351 444 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 ZMPSTE24O75844 475 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 MAP3K6O95382 1288 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 C22orf31O95567 290 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 LCP1P13796 627 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 PTPN3P26045 913 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 EPHA3P29320 983 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 AXLP30530 894 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 SLC26A3P40879 764 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 NAGLUP54802 743 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 GEMP55040 296 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 CCNA1P78396 465 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 MPP1Q00013 466 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 FASTKQ14296 549 aaKnown RBP6.2□□□□□ -1.42
HERC4-209ENST00000473533 AASDHQ4L235 1098 aaPredicted RBP6.2□□□□□ -1.42
HERC4-209ENST00000473533 EFL1Q7Z2Z2 1120 aaKnown RBP6.2□□□□□ -1.42
HERC4-209ENST00000473533 ADAMTS16Q8TE57 1224 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 POP5Q969H6 163 aaKnown RBP6.2□□□□□ -1.42
HERC4-209ENST00000473533 CAAP1Q9H8G2 361 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 FAM49BQ9NUQ9 324 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 DDX18Q9NVP1 670 aaKnown RBP6.2□□□□□ -1.42
HERC4-209ENST00000473533 GTSE1Q9NYZ3 720 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 PKD2L2Q9NZM6 624 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 HACL1Q9UJ83 578 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 AFG3L2Q9Y4W6 797 aa6.2□□□□□ -1.42
HERC4-209ENST00000473533 COPG1Q9Y678 874 aaKnown RBP6.2□□□□□ -1.42
HERC4-209ENST00000473533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 ZBTB42B2RXF5 422 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 MRASO14807 208 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 HUS1O60921 280 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 TOP3BO95985 862 aaKnown RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 UMPSP11172 480 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 ZNF26P17031 533 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 PSMA4P25789 261 aaKnown RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 TKTP29401 623 aaKnown RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 GNL1P36915 607 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 CLCN3P51790 818 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 INHBCP55103 352 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 PKNOX1P55347 436 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 CRADDP78560 199 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 NSUN2Q08J23 767 aaKnown RBP eCLIP6.19□□□□□ -1.42
HERC4-209ENST00000473533 KCTD2Q14681 263 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 COQ5Q5HYK3 327 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 TTC33Q6PID6 262 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 CHSY3Q70JA7 882 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 RAB44Q7Z6P3 723 aaPredicted RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 ZC3HC1Q86WB0 502 aaKnown RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 LRRC49Q8IUZ0 686 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 DEFB106AQ8N104 65 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 LZTR1Q8N653 840 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 METTL25Q8N6Q8 603 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 CCDC185Q8N715 623 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 C7orf31Q8N865 590 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 APPL2Q8NEU8 664 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 OR2T34Q8NGX1 318 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 OR2T3Q8NH03 318 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 MAPK15Q8TD08 544 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 TSPEARQ8WU66 669 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 CNKSR2Q8WXI2 1034 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 PIWIL1Q96J94 861 aaKnown RBP6.19□□□□□ -1.42
HERC4-209ENST00000473533 MAGED4Q96JG8 741 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 SLC45A3Q96JT2 553 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 SPATC1LQ9H0A9 340 aa6.19□□□□□ -1.42
HERC4-209ENST00000473533 HIPK3Q9H422 1215 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms