RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 DNAJC16Q9Y2G8 782 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 CACNA1AO00555 2505 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 RRN3P2A6NIE6 340 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 MEIS2O14770 477 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 MSH4O15457 936 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 SNAP91O60641 907 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 RFPL1O75677 317 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 IFNB1P01574 187 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 ALOX5P09917 674 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 MCF2P10911 925 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 KRT10P13645 584 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 ITGB5P18084 799 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 PRKCHP24723 683 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 CNTFP26441 200 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 RPL22P35268 128 aaKnown RBP10.25□□□□□ -0.77
APTX-216ENST00000472896 ELK3P41970 407 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 GABRB2P47870 512 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 IDH3AP50213 366 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 MAMLD1Q13495 774 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 FLOT2Q14254 428 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 GK3PQ14409 553 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 ACAP1Q15027 740 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 ANKDD1AQ495B1 522 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 CES4AQ5XG92 561 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 KRT80Q6KB66 452 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 PDE12Q6L8Q7 609 aaKnown RBP10.25□□□□□ -0.77
APTX-216ENST00000472896 C16orf46Q6P387 395 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 FRMD7Q6ZUT3 714 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 CYP2U1Q7Z449 544 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 UBR7Q8N806 425 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 TMEM102Q8N9M5 508 aaPredicted RBP10.25□□□□□ -0.77
APTX-216ENST00000472896 FBXL13Q8NEE6 735 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 GSDMBQ8TAX9 411 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 ACMSDQ8TDX5 336 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 RSAD2Q8WXG1 361 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 ADAM2Q99965 735 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 FERMT1Q9BQL6 677 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 TMEM121Q9BTD3 319 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 APOL6Q9BWW8 343 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 TPK1Q9H3S4 243 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 COPS7BQ9H9Q2 264 aaPredicted RBP10.25□□□□□ -0.77
APTX-216ENST00000472896 LIN28AQ9H9Z2 209 aaKnown RBP10.25□□□□□ -0.77
APTX-216ENST00000472896 MRPL40Q9NQ50 206 aaKnown RBP10.25□□□□□ -0.77
APTX-216ENST00000472896 PARVAQ9NVD7 372 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 HSPBP1Q9NZL4 362 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 DOLKQ9UPQ8 538 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 TTLL3Q9Y4R7 772 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 TEX264Q9Y6I9 313 aa10.25□□□□□ -0.77
APTX-216ENST00000472896 CCDC195A0A1B0GUA6 201 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 C9IYK1 514 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 CFAP99D6REC4 459 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 K7ENM7 598 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 XPOTO43592 962 aaKnown RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 BCAS2O75934 225 aaPredicted RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 SORBS2O94875 1100 aaKnown RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 SERPINE1P05121 402 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 ZNF26P17031 533 aaPredicted RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 NPR3P17342 541 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 HOXB8P17481 243 aaPredicted RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 DCKP27707 260 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 ADSLP30566 484 aaPredicted RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 SLC1A6P48664 564 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 CCT8P50990 548 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 CLCN5P51795 746 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 NDST2P52849 883 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 YWHAGP61981 247 aaKnown RBP eCLIP10.24□□□□□ -0.77
APTX-216ENST00000472896 ZFYVE27Q5T4F4 411 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 TEDDM1Q5T9Z0 273 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 IRAK1BP1Q5VVH5 260 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 SPOPLQ6IQ16 392 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 BNC2Q6ZN30 1099 aaPredicted RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 HAUS6Q7Z4H7 955 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 COLGALT2Q8IYK4 626 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 C12orf76Q8N812 135 aaPredicted RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 PCYOX1LQ8NBM8 494 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 SREK1Q8WXA9 508 aaKnown RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 STON2Q8WXE9 905 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 SEMA4DQ92854 862 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 RMDN1Q96DB5 314 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 PKP2Q99959 881 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 TCF25Q9BQ70 676 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 ANKRD60Q9BZ19 345 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 ST6GALNAC4Q9H4F1 302 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 CAAP1Q9H8G2 361 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 RNF19AQ9NV58 838 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 USTQ9Y2C2 406 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 SSUH2Q9Y2M2 353 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 SNX9Q9Y5X1 595 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 GVINP1Q7Z2Y8 2422 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 MYOCOSA0A1B0GUC4 107 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 TMEM114B3SHH9 223 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 FAM47E-STBD1D6RA91 191 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 XPO1O14980 1071 aaKnown RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 AQP9O43315 295 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 NOL3O60936 208 aaKnown RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 TFPTP0C1Z6 253 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 PABPC1P11940 636 aaKnown RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 KRT5P13647 590 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 POLR2EP19388 210 aaKnown RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 GJC1P36383 396 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms