RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 HOXD9P28356 352 aaPredicted RBP14.84□□□□□ -0.03
HIF3A-206ENST00000472815 NAB1Q13506 487 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 SLC12A1Q13621 1099 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 SLC14A2Q15849 920 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 ZNF697Q5TEC3 545 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 EMC10Q5UCC4 262 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 STEAP4Q687X5 459 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 CXorf57Q6NSI4 855 aaKnown RBP14.84□□□□□ -0.03
HIF3A-206ENST00000472815 UNC5AQ6ZN44 842 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 LRRC6Q86X45 466 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.84□□□□□ -0.03
HIF3A-206ENST00000472815 SPATA22Q8NHS9 363 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 GDPD5Q8WTR4 605 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 PTCD2Q8WV60 388 aaKnown RBP14.84□□□□□ -0.03
HIF3A-206ENST00000472815 TTC17Q96AE7 1141 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 MRPL38Q96DV4 380 aaKnown RBP14.84□□□□□ -0.03
HIF3A-206ENST00000472815 PAFAH2Q99487 392 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 C2orf49Q9BVC5 232 aaPredicted RBP14.84□□□□□ -0.03
HIF3A-206ENST00000472815 KIAA1522Q9P206 1035 aaPredicted RBP14.84□□□□□ -0.03
HIF3A-206ENST00000472815 VPS28Q9UK41 221 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 ACTL7BQ9Y614 415 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 ATG2AQ2TAZ0 1938 aa14.84□□□□□ -0.03
HIF3A-206ENST00000472815 NUP210Q8TEM1 1887 aaPredicted RBP14.84□□□□□ -0.03
HIF3A-206ENST00000472815 IQANK1A0A1B0GTG1 560 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 USP12O75317 370 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 MOSPD3O75425 235 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 SERPINF2P08697 491 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 KRT15P19012 456 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 PRKCHP24723 683 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 GBP2P32456 591 aaPredicted RBP14.83□□□□□ -0.03
HIF3A-206ENST00000472815 TMED2Q15363 201 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 SLC5A9Q2M3M2 681 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 TNFAIP8L3Q5GJ75 292 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 ALG1LQ6GMV1 187 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 POTEHQ6S545 545 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 ADGRD2Q7Z7M1 963 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 ACDQ96AP0 544 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 ZNF707Q96C28 371 aaPredicted RBP14.83□□□□□ -0.03
HIF3A-206ENST00000472815 PSKH2Q96QS6 385 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 FICDQ9BVA6 458 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 SYBUQ9NX95 663 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 TBK1Q9UHD2 729 aa14.83□□□□□ -0.03
HIF3A-206ENST00000472815 DOCK6Q96HP0 2047 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 TMEM265A0A087WTH1 108 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 CXorf51AA0A1B0GTR3 108 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 FAM237BA0A1B0GVD1 139 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 PMPCBO75439 489 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 USP1O94782 785 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 WEE1P30291 646 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 CD86P42081 329 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 SKOR1P84550 965 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 LAMB3Q13751 1172 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 KBTBD12Q3ZCT8 623 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 INO80DQ53TQ3 878 aaPredicted RBP14.83□□□□□ -0.04
HIF3A-206ENST00000472815 RETSATQ6NUM9 610 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 ADGRD1Q6QNK2 874 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 CTAGE3PQ8IX95 158 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 AGGF1Q8N302 714 aaeCLIP14.83□□□□□ -0.04
HIF3A-206ENST00000472815 MPP5Q8N3R9 675 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 DCAF4L2Q8NA75 395 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 PPHLN1Q8NEY8 458 aaKnown RBP14.83□□□□□ -0.04
HIF3A-206ENST00000472815 FIBINQ8TAL6 211 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 USP13Q92995 863 aaPredicted RBP14.83□□□□□ -0.04
HIF3A-206ENST00000472815 NOTCH4Q99466 2003 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 MGME1Q9BQP7 344 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 FEM1AQ9BSK4 669 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 RPS6KL1Q9Y6S9 549 aa14.83□□□□□ -0.04
HIF3A-206ENST00000472815 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.82□□□□□ -0.04
HIF3A-206ENST00000472815 SCAMP3O14828 347 aaKnown RBP14.82□□□□□ -0.04
HIF3A-206ENST00000472815 CA4P22748 312 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 ADRA1AP35348 466 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 WNT3AP56704 352 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 MAXP61244 160 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 USP4Q13107 963 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 FRG1Q14331 258 aaKnown RBP14.82□□□□□ -0.04
HIF3A-206ENST00000472815 CRYMQ14894 314 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 RALGPS1Q5JS13 557 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 PCID2Q5JVF3 399 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 TPGS1Q6ZTW0 290 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 SLC26A11Q86WA9 606 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 CELF5Q8N6W0 485 aaKnown RBP14.82□□□□□ -0.04
HIF3A-206ENST00000472815 SLC44A1Q8WWI5 657 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 IFT43Q96FT9 208 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 ZNF419Q96HQ0 510 aaPredicted RBP14.82□□□□□ -0.04
HIF3A-206ENST00000472815 MRGPRX2Q96LB1 330 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 SEMA3CQ99985 751 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 SMG9Q9H0W8 520 aaKnown RBP14.82□□□□□ -0.04
HIF3A-206ENST00000472815 ARNT2Q9HBZ2 717 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 PPANQ9NQ55 473 aaKnown RBP14.82□□□□□ -0.04
HIF3A-206ENST00000472815 EURLQ9NYK6 297 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 ZNF180Q9UJW8 692 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 SOX13Q9UN79 622 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 CDH23Q9H251 3354 aa14.82□□□□□ -0.04
HIF3A-206ENST00000472815 ATP9BO43861 1147 aa14.81□□□□□ -0.04
HIF3A-206ENST00000472815 KRT37O76014 449 aa14.81□□□□□ -0.04
HIF3A-206ENST00000472815 ALDH1A2O94788 518 aa14.81□□□□□ -0.04
HIF3A-206ENST00000472815 EPOP01588 193 aa14.81□□□□□ -0.04
HIF3A-206ENST00000472815 PAMP19021 973 aa14.81□□□□□ -0.04
HIF3A-206ENST00000472815 SERPINB9P50453 376 aa14.81□□□□□ -0.04
HIF3A-206ENST00000472815 GYS2P54840 703 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms