RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 CCDC65Q8IXS2 484 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 NLGN4XQ8N0W4 816 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 GPD1LQ8N335 351 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 CSGALNACT2Q8N6G5 542 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 TTC9BQ8N6N2 239 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 MDGA1Q8NFP4 955 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 TTC8Q8TAM2 541 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 GOLGA5Q8TBA6 731 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 SCFD1Q8WVM8 642 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 PIGKQ92643 395 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 MRFAP1L1Q96HT8 127 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 LCORQ96JN0 433 aaPredicted RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 TNIP3Q96KP6 325 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 C8orf48Q96LL4 319 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 MAGEB10Q96LZ2 347 aaPredicted RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 CLIC6Q96NY7 704 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 XPO6Q96QU8 1125 aaKnown RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 CDK5RAP1Q96SZ6 601 aaKnown RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 SYT15Q9BQS2 421 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 FAM213AQ9BRX8 229 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 TACO1Q9BSH4 297 aaKnown RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 PI4K2AQ9BTU6 479 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 MMTAG2Q9BU76 263 aaKnown RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 TTLL2Q9BWV7 592 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 SNX25Q9H3E2 840 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 FBXO44Q9H4M3 255 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 L2HGDHQ9H9P8 463 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 MAGEF1Q9HAY2 307 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 RIC8BQ9NVN3 520 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 FANCLQ9NW38 375 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 COMMD8Q9NX08 183 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 TBC1D7Q9P0N9 293 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 PPP4R1LQ9P1A2 415 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 DEC1Q9P2X7 70 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 MAGEC2Q9UBF1 373 aaPredicted RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 LSM7Q9UK45 103 aaKnown RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 L1RE1Q9UN81 338 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 AGAP1Q9UPQ3 857 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 SMC3Q9UQE7 1217 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 CCL26Q9Y258 94 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 MYRFQ9Y2G1 1151 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 SH3BP1Q9Y3L3 701 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 SNX9Q9Y5X1 595 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 MORC2Q9Y6X9 1032 aaPredicted RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 NUP210Q8TEM1 1887 aaPredicted RBP3.7□□□□□ -1.82
XRN1-209ENST00000472625 ZZEF1O43149 2961 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 LOC400499M0QZD8 3231 aa3.7□□□□□ -1.82
XRN1-209ENST00000472625 TCRBV21S2A2A0A5A6 115 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 TBC1D3BA6NDS4 549 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 ZNF840PA6NDX5 716 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 ZNF233A6NK53 670 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 EIF4E1BA6NMX2 242 aaKnown RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 E9PAM4 449 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 GOLGA6L22H0YM25 854 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 LEFTY2O00292 366 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 MATN2O00339 956 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 GABRDO14764 452 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 EIF3DO15371 548 aaKnown RBP eCLIP3.69□□□□□ -1.82
XRN1-209ENST00000472625 HOXC11O43248 304 aaPredicted RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 NDUFS2O75306 463 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 TACC1O75410 805 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 KIF20AO95235 890 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 CNOT4O95628 575 aaKnown RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 CER1O95813 267 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 OLFM2O95897 454 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 OAS1P00973 400 aaKnown RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 ASLP04424 464 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 CYP17A1P05093 508 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 CFIP05156 583 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 SERPINF2P08697 491 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 MBL2P11226 248 aaPredicted RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 CDK4P11802 303 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 HOXB2P14652 356 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 ARSAP15289 507 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 NAT1P18440 290 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 WARSP23381 471 aaKnown RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 CYP2F1P24903 491 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 YWHAQP27348 245 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 GJB2P29033 226 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 OXTRP30559 389 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 ATICP31939 592 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 IGFALSP35858 605 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 P2RY2P41231 377 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 STAT6P42226 847 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 GLRBP48167 497 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 PXNP49023 591 aaPredicted RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 GUCY2FP51841 1108 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 SLC8A3P57103 927 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 SIM1P81133 766 aaPredicted RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 ST3GAL1Q11201 340 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 DUSP8Q13202 625 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 TRPC3Q13507 836 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 DHX8Q14562 1220 aaKnown RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 EIF4HQ15056 248 aaKnown RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 SEPT7Q16181 437 aaKnown RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 UAP1L1Q3KQV9 507 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 HECTD3Q5T447 861 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 RRAGBQ5VZM2 374 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 TCEAL6Q6IPX3 200 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 SLC39A4Q6P5W5 647 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms