RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PDGFBP01127 241 aaPredicted RBP17.8■□□□□ 0.44
HSPG2-208ENST00000471322 MSH2P43246 934 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 MAPKAPK2P49137 400 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 RAP1GAP2Q684P5 730 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 LEKR1Q6ZMV7 388 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 TRIM67Q6ZTA4 783 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 CYS1Q717R9 158 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 CHSY1Q86X52 802 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 MFSD6LQ8IWD5 586 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 UBALD2Q8IYN6 164 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 TTC8Q8TAM2 541 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 DEPDC1BQ8WUY9 529 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 MAML1Q92585 1016 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 AGAP3Q96P47 875 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 IL12RB2Q99665 862 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 CEP41Q9BYV8 373 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 BRD9Q9H8M2 597 aa17.8■□□□□ 0.44
HSPG2-208ENST00000471322 F5H5T6 163 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 CACNG3O60359 315 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 ACSL4O60488 711 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 OAS1P00973 400 aaKnown RBP17.79■□□□□ 0.44
HSPG2-208ENST00000471322 PAPOLAP51003 745 aaKnown RBP17.79■□□□□ 0.44
HSPG2-208ENST00000471322 ZBTB17Q13105 803 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 C5orf22Q49AR2 442 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 YAF2Q8IY57 180 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 CNPY4Q8N129 248 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 SIX5Q8N196 739 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 CELF5Q8N6W0 485 aaKnown RBP17.79■□□□□ 0.44
HSPG2-208ENST00000471322 SH3RF2Q8TEC5 729 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 RPRD1AQ96P16 312 aaPredicted RBP17.79■□□□□ 0.44
HSPG2-208ENST00000471322 XPO6Q96QU8 1125 aaKnown RBP17.79■□□□□ 0.44
HSPG2-208ENST00000471322 DDX50Q9BQ39 737 aaKnown RBP17.79■□□□□ 0.44
HSPG2-208ENST00000471322 C11orf16Q9NQ32 467 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 IPO11Q9UI26 975 aaKnown RBP17.79■□□□□ 0.44
HSPG2-208ENST00000471322 AAR2Q9Y312 384 aaKnown RBP17.79■□□□□ 0.44
HSPG2-208ENST00000471322 CPQQ9Y646 472 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 MAD1L1Q9Y6D9 718 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 IKBKGQ9Y6K9 419 aa17.79■□□□□ 0.44
HSPG2-208ENST00000471322 ZDBF2Q9HCK1 2354 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 TCRBV9S1A1TA0A576 114 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 ANXA9O76027 345 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 MBL2P11226 248 aaPredicted RBP17.78■□□□□ 0.44
HSPG2-208ENST00000471322 TACR2P21452 398 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 GCAP28676 217 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 CD68P34810 354 aaPredicted RBP17.78■□□□□ 0.44
HSPG2-208ENST00000471322 IFNAR2P48551 515 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 YBEYP58557 167 aaPredicted RBP17.78■□□□□ 0.44
HSPG2-208ENST00000471322 TNK2Q07912 1038 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 SIGLEC14Q08ET2 396 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 PARP15Q460N3 678 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 TRIM68Q6AZZ1 485 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 ADGRD1Q6QNK2 874 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 LINC00523Q86TU6 105 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 KLHDC8BQ8IXV7 354 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 BPIFB1Q8TDL5 484 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 STAMBPL1Q96FJ0 436 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 ASIC4Q96FT7 647 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 CFAP36Q96G28 342 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 SELENOSQ9BQE4 189 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 DHRS4Q9BTZ2 278 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 LRRC40Q9H9A6 602 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 CTNNAL1Q9UBT7 734 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 TBK1Q9UHD2 729 aa17.78■□□□□ 0.44
HSPG2-208ENST00000471322 COL4A3Q01955 1670 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 TMEM221A6NGB7 291 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 M0R296 226 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 NEBLO76041 1014 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 NFKB1P19838 968 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 RENBPP51606 427 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 GUCY1A3Q02108 690 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 MTM1Q13496 603 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 TMED2Q15363 201 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 RABGAP1LQ5R372 815 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 FAM182AQ5T1J6 154 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 KCTD11Q693B1 232 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 ZNF771Q7L3S4 317 aaPredicted RBP17.77■□□□□ 0.44
HSPG2-208ENST00000471322 AGGF1Q8N302 714 aaeCLIP17.77■□□□□ 0.44
HSPG2-208ENST00000471322 GSDMBQ8TAX9 411 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 NSMCE1Q8WV22 266 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 IGSF8Q969P0 613 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 FCRL5Q96RD9 977 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 GKN1Q9NS71 199 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 NDFIP2Q9NV92 336 aa17.77■□□□□ 0.44
HSPG2-208ENST00000471322 NUP210Q8TEM1 1887 aaPredicted RBP17.77■□□□□ 0.43
HSPG2-208ENST00000471322 KRBA1A5PL33 1030 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 RASA4BC9J798 803 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 RASA4O43374 803 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 IRF1P10914 325 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 PRKCHP24723 683 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 LSP1P33241 339 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 GRIA1P42261 906 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 NPY2RP49146 381 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 FCHO2Q0JRZ9 810 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 HNRNPDQ14103 355 aaKnown RBP17.76■□□□□ 0.43
HSPG2-208ENST00000471322 ALFQ53S48 1182 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 NADSYN1Q6IA69 706 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 NAPEPLDQ6IQ20 393 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 TFAP2DQ7Z6R9 452 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 CYP4X1Q8N118 509 aa17.76■□□□□ 0.43
HSPG2-208ENST00000471322 E2F7Q96AV8 911 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms