RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 SEPT6Q14141 434 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 STAT4Q14765 748 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 DEFB133Q30KQ1 61 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 ZNF394Q53GI3 561 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 COBLL1Q53SF7 1204 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 C9orf64Q5T6V5 341 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 MBLAC2Q68D91 279 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 ANKRD40Q6AI12 368 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 GPRIN1Q7Z2K8 1008 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 KIAA0907Q7Z7F0 614 aaPredicted RBP6.03□□□□□ -1.44
VARS-222ENST00000470953 UNC93AQ86WB7 457 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 CCDC13Q8IYE1 715 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 OR13H1Q8NG92 308 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 TMEM174Q8WUU8 243 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 GOLGA1Q92805 767 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 KLK6Q92876 244 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 USP7Q93009 1102 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 HDAC11Q96DB2 347 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 KLHDC7BQ96G42 594 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 NT5C1BQ96P26 610 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 FAM129BQ96TA1 746 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 SMOQ99835 787 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 SDCBP2Q9H190 292 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 NUP62CLQ9H1M0 184 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 FBXO44Q9H4M3 255 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 FBRSQ9HAH7 460 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 USP29Q9HBJ7 922 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 FZD3Q9NPG1 666 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 RAB20Q9NX57 234 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 HESX1Q9UBX0 185 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 CYTH4Q9UIA0 394 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 KLF15Q9UIH9 416 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 ADAM21Q9UKJ8 722 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 FZD4Q9ULV1 537 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 NEU2Q9Y3R4 380 aa6.03□□□□□ -1.44
VARS-222ENST00000470953 A0A1W2PQC6 194 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 A0A1W2PQH9 124 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 ZNF891A8MT65 544 aaPredicted RBP6.02□□□□□ -1.45
VARS-222ENST00000470953 TTC34A8MYJ7 566 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 DLDP09622 509 aaKnown RBP6.02□□□□□ -1.45
VARS-222ENST00000470953 PRLRP16471 622 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 GOT1P17174 413 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 CORO1AP31146 461 aaKnown RBP6.02□□□□□ -1.45
VARS-222ENST00000470953 CD70P32970 193 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 CHKAP35790 457 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 PLA2G4AP47712 749 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 PSMD8P48556 350 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 SGSHP51688 502 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 PMS1P54277 932 aaKnown RBP6.02□□□□□ -1.45
VARS-222ENST00000470953 CLDN2P57739 230 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 INCA1Q0VD86 236 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 CDC20Q12834 499 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 OVGP1Q12889 678 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 LRMPQ12912 555 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 SPIDRQ14159 915 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 C10orf120Q5SQS8 335 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 ATP1A1-AS1Q5TC04 95 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 ZCCHC8Q6NZY4 707 aaKnown RBP6.02□□□□□ -1.45
VARS-222ENST00000470953 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.02□□□□□ -1.45
VARS-222ENST00000470953 TADA2BQ86TJ2 420 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 DENND1CQ8IV53 801 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 ELOA2Q8IYF1 753 aaPredicted RBP6.02□□□□□ -1.45
VARS-222ENST00000470953 PPM1KQ8N3J5 372 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 TMEM145Q8NBT3 493 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 ZNF548Q8NEK5 533 aaPredicted RBP6.02□□□□□ -1.45
VARS-222ENST00000470953 DDI1Q8WTU0 396 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 NKD1Q969G9 470 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 PMEPA1Q969W9 287 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 C19orf60Q96EN9 201 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 MRGPRX3Q96LB0 322 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 CCDC3Q9BQI4 270 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 CALN1Q9BXU9 219 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 APOBEC3GQ9HC16 384 aaKnown RBP6.02□□□□□ -1.45
VARS-222ENST00000470953 TLR8Q9NR97 1041 aaKnown RBP6.02□□□□□ -1.45
VARS-222ENST00000470953 CISHQ9NSE2 258 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.02□□□□□ -1.45
VARS-222ENST00000470953 LUZP4Q9P127 313 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 SCML1Q9UN30 329 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 LOXL2Q9Y4K0 774 aa6.02□□□□□ -1.45
VARS-222ENST00000470953 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.02□□□□□ -1.45
VARS-222ENST00000470953 A0A1W2PQM1 296 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 SLC12A8A0AV02 714 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 TARSL2A2RTX5 802 aaKnown RBP6.01□□□□□ -1.45
VARS-222ENST00000470953 NEMP2A6NFY4 417 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 PRAMEF26H0Y7S4 382 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 MKRN2OSH3BPM6 223 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 HAX1O00165 279 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 SLC31A1O15431 190 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 KRT86O43790 486 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 MAGEC1O60732 1142 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 TPM2P07951 284 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 JMJD7P0C870 316 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 RALAP11233 206 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 PABPC1P11940 636 aaKnown RBP6.01□□□□□ -1.45
VARS-222ENST00000470953 KRT5P13647 590 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 FOSL1P15407 271 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 VAV1P15498 845 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 SSTR2P30874 369 aa6.01□□□□□ -1.45
VARS-222ENST00000470953 RBMXP38159 391 aaKnown RBP6.01□□□□□ -1.45
VARS-222ENST00000470953 CTSOP43234 321 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms