RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ATP8A1Q9Y2Q0 1164 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 FARP1Q9Y4F1 1045 aaPredicted RBP9.92□□□□□ -0.82
CCM2-204ENST00000470837 OR51B4Q9Y5P0 310 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 ANAPC1Q9H1A4 1944 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 C2CD4DB7Z1M9 353 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 BHMG1C9JSJ3 638 aaPredicted RBP9.91□□□□□ -0.82
CCM2-204ENST00000470837 EIF3HO15372 352 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCM2-204ENST00000470837 PPFIA2O75334 1257 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 PMPCBO75439 489 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 AP2A1O95782 977 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 PEX11BO96011 259 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 APODP05090 189 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 H2AFXP16104 143 aaPredicted RBP9.91□□□□□ -0.82
CCM2-204ENST00000470837 GLDCP23378 1020 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 EIF2DP41214 584 aaKnown RBP9.91□□□□□ -0.82
CCM2-204ENST00000470837 CD86P42081 329 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 MAGEA6P43360 314 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 SCNN1BP51168 640 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 MAXP61244 160 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 SNRPD1P62314 119 aaKnown RBP9.91□□□□□ -0.82
CCM2-204ENST00000470837 ARF5P84085 180 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 PFKPQ01813 784 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 RAD51Q06609 339 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 KCNJ11Q14654 390 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 SMAD2Q15796 467 aaKnown RBP9.91□□□□□ -0.82
CCM2-204ENST00000470837 AAK1Q2M2I8 961 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 FUT11Q495W5 492 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 RALGPS1Q5JS13 557 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 CFAP58Q5T655 872 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 CASC4Q6P4E1 433 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 FBXO38Q6PIJ6 1188 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 ZDHHC24Q6UX98 284 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 SUGP1Q8IWZ8 645 aaKnown RBP9.91□□□□□ -0.82
CCM2-204ENST00000470837 CNTD1Q8N815 330 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCM2-204ENST00000470837 IPMKQ8NFU5 416 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 CAVIN3Q969G5 261 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 ALG14Q96F25 216 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 GDAP1L1Q96MZ0 367 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 RBM15Q96T37 977 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCM2-204ENST00000470837 RUFY1Q96T51 708 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 SEMA3CQ99985 751 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 MGME1Q9BQP7 344 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 PLA2G2FQ9BZM2 168 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 PHACTR1Q9C0D0 580 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 CEP44Q9C0F1 390 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 HPS4Q9NQG7 708 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 ZDHHC18Q9NUE0 388 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 GTSE1Q9NYZ3 720 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 UBP1Q9NZI7 540 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 BFARQ9NZS9 450 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 SAMD15Q9P1V8 674 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 LIMD1Q9UGP4 676 aa9.91□□□□□ -0.82
CCM2-204ENST00000470837 OBSL1O75147 1896 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 INSIG1O15503 277 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 BNIP3LO60238 219 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 ZMPSTE24O75844 475 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 CPP00450 1065 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 SRPRAP08240 638 aaKnown RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 DLDP09622 509 aaKnown RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 MYBL2P10244 700 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 MLNP12872 115 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 CD68P34810 354 aaPredicted RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 GJA4P35212 333 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 GRIA2P42262 883 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 PMS2P54278 862 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 AP1S1P61966 158 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 DSC2Q02487 901 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 KDSRQ06136 332 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 NSUN2Q08J23 767 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCM2-204ENST00000470837 PDIA2Q13087 525 aaKnown RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 CYTH1Q15438 398 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 PCSK7Q16549 785 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 BBS9Q3SYG4 887 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 FNDC3BQ53EP0 1204 aaKnown RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 ANKRD22Q5VYY1 191 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 LRRC8BQ6P9F7 803 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 TRMT10CQ7L0Y3 403 aaKnown RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 HDXQ7Z353 690 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 ETFBKMTQ8IXQ9 262 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 PALM2Q8IXS6 379 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 ZBED8Q8IZ13 594 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 PCDH20Q8N6Y1 951 aaKnown RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 TSEN2Q8NCE0 465 aaKnown RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 SPATA22Q8NHS9 363 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 MAFAQ8NHW3 353 aaPredicted RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 AENQ8WTP8 325 aaKnown RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 PYROXD1Q8WU10 500 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 UBLCP1Q8WVY7 318 aaPredicted RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 ANKRD7Q92527 254 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 TTC17Q96AE7 1141 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 LRRC39Q96DD0 335 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 IMP4Q96G21 291 aaKnown RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 RPL10LQ96L21 214 aaKnown RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 TTC25Q96NG3 672 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 SERPINB12Q96P63 405 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 NUDCD1Q96RS6 583 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 TBL1YQ9BQ87 522 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 ADGRE3Q9BY15 652 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms