RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 TFB1MQ8WVM0 346 aaKnown RBP12.84□□□□□ -0.35
SND1-209ENST00000470723 NELL1Q92832 810 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 NKD2Q969F2 451 aaPredicted RBP12.84□□□□□ -0.35
SND1-209ENST00000470723 LRIG1Q96JA1 1093 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 CPEB1Q9BZB8 566 aaKnown RBP12.84□□□□□ -0.35
SND1-209ENST00000470723 RSPH9Q9H1X1 276 aaPredicted RBP12.84□□□□□ -0.35
SND1-209ENST00000470723 SP110Q9HB58 689 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 POLMQ9NP87 494 aaPredicted RBP12.84□□□□□ -0.35
SND1-209ENST00000470723 PRMT8Q9NR22 394 aaPredicted RBP12.84□□□□□ -0.35
SND1-209ENST00000470723 HOMER3Q9NSC5 361 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 LHX3Q9UBR4 397 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 RNF14Q9UBS8 474 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 SEPT3Q9UH03 358 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 FBXO4Q9UKT5 387 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 PPM1HQ9ULR3 514 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 ATP8A1Q9Y2Q0 1164 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 SAR1BQ9Y6B6 198 aa12.84□□□□□ -0.35
SND1-209ENST00000470723 KIF2AO00139 706 aaPredicted RBP12.83□□□□□ -0.36
SND1-209ENST00000470723 SYNCRIPO60506 623 aaKnown RBP12.83□□□□□ -0.36
SND1-209ENST00000470723 MAP3K6O95382 1288 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 EPHX1P07099 455 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 RBP3P10745 1247 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 HOXB2P14652 356 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 STIP1P31948 543 aaKnown RBP12.83□□□□□ -0.36
SND1-209ENST00000470723 WASP42768 502 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 NUMBP49757 651 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 SNRPD1P62314 119 aaKnown RBP12.83□□□□□ -0.36
SND1-209ENST00000470723 SATB1Q01826 763 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 ZBTB16Q05516 673 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 ELAVL3Q14576 367 aaKnown RBP12.83□□□□□ -0.36
SND1-209ENST00000470723 STARD3Q14849 445 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 ZNF528Q3MIS6 628 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 ACCSLQ4AC99 568 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 TEX44Q53QW1 395 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 C22orf39Q6P5X5 142 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 ZNF354CQ86Y25 554 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 PGBD5Q8N414 524 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 CNTD1Q8N815 330 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 CCNYQ8ND76 341 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 OR2AP1Q8NGE2 309 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 HCAR2Q8TDS4 363 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 NSMCE1Q8WV22 266 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 ZNF419Q96HQ0 510 aaPredicted RBP12.83□□□□□ -0.36
SND1-209ENST00000470723 QKIQ96PU8 341 aaKnown RBP eCLIP12.83□□□□□ -0.363e-12■■■■□ 19.3
SND1-209ENST00000470723 NAP1L3Q99457 506 aaPredicted RBP12.83□□□□□ -0.36
SND1-209ENST00000470723 VAT1Q99536 393 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 MTG2Q9H4K7 406 aa12.83□□□□□ -0.36
SND1-209ENST00000470723 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.36
SND1-209ENST00000470723 RBM22Q9NW64 420 aaKnown RBP eCLIP12.83□□□□□ -0.36
SND1-209ENST00000470723 SPATA6Q9NWH7 488 aaPredicted RBP12.83□□□□□ -0.36
SND1-209ENST00000470723 R3HDM2Q9Y2K5 976 aaKnown RBP12.83□□□□□ -0.36
SND1-209ENST00000470723 FCF1Q9Y324 198 aaKnown RBP12.83□□□□□ -0.36
SND1-209ENST00000470723 MUSKO15146 869 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 JCHAINP01591 159 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 VAV1P15498 845 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 CASQ1P31415 396 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 CHRNA3P32297 505 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 MMP13P45452 471 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 EIF3EP60228 445 aaKnown RBP12.82□□□□□ -0.36
SND1-209ENST00000470723 AP1B1Q10567 949 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 WASHC5Q12768 1159 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 OASLQ15646 514 aaKnown RBP12.82□□□□□ -0.36
SND1-209ENST00000470723 CYP1B1Q16678 543 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 LONRF2Q1L5Z9 754 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 CCDC181Q5TID7 509 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 SYT10Q6XYQ8 523 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 LEKR1Q6ZMV7 388 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 DPY19L3Q6ZPD9 716 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 Q6ZVU0 165 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 ZC3H18Q86VM9 953 aaKnown RBP12.82□□□□□ -0.36
SND1-209ENST00000470723 TMPRSS6Q8IU80 811 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 STK40Q8N2I9 435 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 BBS5Q8N3I7 341 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 ZNF366Q8N895 744 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 TSEN2Q8NCE0 465 aaKnown RBP12.82□□□□□ -0.36
SND1-209ENST00000470723 HTR3CQ8WXA8 447 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 SPOCK2Q92563 424 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 FAM131CQ96AQ9 280 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 RTP4Q96DX8 246 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 MS4A14Q96JA4 679 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 MRGPRX1Q96LB2 322 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 TEKT5Q96M29 485 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 MGME1Q9BQP7 344 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 HEPHQ9BQS7 1158 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 FAM126AQ9BYI3 521 aaPredicted RBP12.82□□□□□ -0.36
SND1-209ENST00000470723 MKRN2Q9H000 416 aaKnown RBP12.82□□□□□ -0.36
SND1-209ENST00000470723 HECAQ9UBI9 543 aaPredicted RBP12.82□□□□□ -0.36
SND1-209ENST00000470723 SCML1Q9UN30 329 aa12.82□□□□□ -0.36
SND1-209ENST00000470723 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
SND1-209ENST00000470723 C5orf60A6NFR6 353 aa12.81□□□□□ -0.36
SND1-209ENST00000470723 ZNF185O15231 689 aa12.81□□□□□ -0.36
SND1-209ENST00000470723 LAMTOR5O43504 91 aa12.81□□□□□ -0.36
SND1-209ENST00000470723 GALR2O43603 387 aaPredicted RBP12.81□□□□□ -0.36
SND1-209ENST00000470723 LIASO43766 372 aa12.81□□□□□ -0.36
SND1-209ENST00000470723 ALDH1A2O94788 518 aa12.81□□□□□ -0.36
SND1-209ENST00000470723 APBB3O95704 486 aa12.81□□□□□ -0.36
SND1-209ENST00000470723 IGLV3-19P01714 112 aa12.81□□□□□ -0.36
SND1-209ENST00000470723 ITGAVP06756 1048 aa12.81□□□□□ -0.36
SND1-209ENST00000470723 GABRG2P18507 467 aa12.81□□□□□ -0.36
SND1-209ENST00000470723 PTPN3P26045 913 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms