RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 CLPPQ16740 277 aaPredicted RBP9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 INSCQ1MX18 579 aa9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 SWSAP1Q6NVH7 229 aa9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 IFNEQ86WN2 208 aa9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 SPPL2CQ8IUH8 684 aa9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 CDKL3Q8IVW4 592 aaPredicted RBP9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 CNTD1Q8N815 330 aa9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 ABHD11Q8NFV4 315 aa9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 RPL10LQ96L21 214 aaKnown RBP9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 CGREF1Q99674 301 aa9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 UNC93B1Q9H1C4 597 aa9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 NANOGQ9H9S0 305 aa9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 IFT80Q9P2H3 777 aaPredicted RBP9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 CCNL1Q9UK58 526 aaPredicted RBP9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 SPO11Q9Y5K1 396 aa9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 SLC30A1Q9Y6M5 507 aa9.66□□□□□ -0.86
NHLRC3-203ENST00000470258 TMEM114B3SHH9 223 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 MRASO14807 208 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 GPC4O75487 556 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 SRP72O76094 671 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 ASS1P00966 412 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 CAPNS1P04632 268 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 NAT1P18440 290 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 ATP6V1B2P21281 511 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 ELK4P28324 431 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 POLR2IP36954 125 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 FASTKQ14296 549 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 REP15Q6BDI9 236 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 FSTL4Q6MZW2 842 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 FRA10AC1Q70Z53 315 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 CCDC60Q8IWA6 550 aaPredicted RBP9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 PARP8Q8N3A8 854 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 DHRSXQ8N5I4 330 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 OR9I1Q8NGQ6 314 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 FNIP1Q8TF40 1166 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 HTRA1Q92743 480 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 NRBF2Q96F24 287 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 PIWIL1Q96J94 861 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 OMDQ99983 421 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 VPS33BQ9H267 617 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 PARVBQ9HBI1 364 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 ARHGAP28Q9P2N2 729 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 CNTN6Q9UQ52 1028 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 AURKAO14965 403 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 GPD1P21695 349 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 MZF1P28698 734 aaPredicted RBP9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 LRPAP1P30533 357 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 PTPN9P43378 593 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 RGS7P49802 495 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 PRKAA2P54646 552 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 LSM3P62310 102 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 CLCQ05315 142 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 TNK2Q07912 1038 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 PRKAA1Q13131 559 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 STX5Q13190 355 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 OTUD3Q5T2D3 398 aaPredicted RBP9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 FAM219BQ5XKK7 198 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 FAM117BQ6P1L5 589 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 C15orf52Q6ZUT6 534 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 PIGZQ86VD9 579 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 TMEM130Q8N3G9 435 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 ACVR1CQ8NER5 493 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 MAGEB5Q9BZ81 275 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 TRIM8Q9BZR9 551 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 HMG20AQ9NP66 347 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 MRPL40Q9NQ50 206 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 ANKEF1Q9NU02 776 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 CACNA2D2Q9NY47 1150 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 TLK1Q9UKI8 766 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 TRAF6Q9Y4K3 522 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 PCDHGA3Q9Y5H0 932 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 ANKRD12Q6UB98 2062 aa9.65□□□□□ -0.86
NHLRC3-203ENST00000470258 CCDC162PA2VCL2 907 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 C9JVG2 144 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 HNRNPLP14866 589 aaKnown RBP eCLIP9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 IL10P22301 178 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 ALDH4A1P30038 563 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 SPRP35270 261 aaPredicted RBP9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 NUMBP49757 651 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 KCNC4Q03721 635 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 ZNF846Q147U1 533 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 POLD3Q15054 466 aaPredicted RBP9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 ARL13BQ3SXY8 428 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 ERMP1Q7Z2K6 904 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 EPHX4Q8IUS5 362 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 SHCBP1Q8NEM2 672 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 OR2T34Q8NGX1 318 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 OR2T3Q8NH03 318 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 URGCPQ8TCY9 931 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 CHURC1Q8WUH1 139 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 SNX19Q92543 992 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 CERS2Q96G23 380 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 KLQ9UEF7 1012 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 FAM198AQ9UFP1 575 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 PSME2Q9UL46 239 aa9.65□□□□□ -0.87
NHLRC3-203ENST00000470258 DHRS12A0PJE2 317 aa9.64□□□□□ -0.87
NHLRC3-203ENST00000470258 BCLAF3A2AJT9 711 aaKnown RBP9.64□□□□□ -0.87
NHLRC3-203ENST00000470258 ANKRD34BA5PLL1 514 aa9.64□□□□□ -0.87
NHLRC3-203ENST00000470258 NOTOA8MTQ0 251 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms