RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 BEST1O76090 585 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 WDR47O94967 919 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 RPL5P46777 297 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 CBLBQ13191 982 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 KIF19Q2TAC6 998 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 FUT10Q6P4F1 479 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 C4orf33Q8N1A6 199 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 ZNF296Q8WUU4 475 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 PWWP2AQ96N64 755 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 HIPK3Q9H422 1215 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 MTMR10Q9NXD2 777 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 KIF17Q9P2E2 1029 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 TLR6Q9Y2C9 796 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 NME7Q9Y5B8 376 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 SNTNA6NMZ2 147 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 NR1H2P55055 460 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 NRG1Q02297 640 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 GALNT2Q10471 571 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 GPR17Q13304 367 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 LRRC14Q15048 493 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 B3GNT6Q6ZMB0 384 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 CYP4V2Q6ZWL3 525 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 LUZP2Q86TE4 346 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 OR10T2Q8NGX3 314 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 TMEM169Q96HH4 297 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 APOL4Q9BPW4 351 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 IL22Q9GZX6 179 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 HMG20AQ9NP66 347 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 RALGAPA2Q2PPJ7 1873 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 TRIM49D1C9J1S8 452 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 NRP1O14786 923 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 DCLK1O15075 740 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 ETFBP38117 255 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 PKN2Q16513 984 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 TEX44Q53QW1 395 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 NCLNQ969V3 563 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 E2F7Q96AV8 911 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 VPS50Q96JG6 964 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 C1orf74Q96LT6 269 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 ARHGEF38Q9NXL2 777 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 VPS9D1Q9Y2B5 631 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 TTLL3Q9Y4R7 772 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 H7C0S8 307 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 SRP72O76094 671 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 SOX6P35712 828 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 SLC11A2P49281 568 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 PDAP1Q13442 181 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 PYROXD2Q8N2H3 581 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 DBF4BQ8NFT6 615 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 RMND5BQ96G75 393 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 BTN2A3PQ96KV6 586 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 C1orf50Q9BV19 199 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 GBA3Q9H227 469 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 VPS11Q9H270 941 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 APPL1Q9UKG1 709 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 VANGL2Q9ULK5 521 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 ENPP3O14638 875 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 LRIG2O94898 1065 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 HARS2P49590 506 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 RENBPP51606 427 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 HK2P52789 917 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 SNX30Q5VWJ9 437 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 HFE2Q6ZVN8 426 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 ZMIZ2Q8NF64 920 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 PTCD2Q8WV60 388 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 OVCA2Q8WZ82 227 aa7.09□□□□□ -1.27
GAPVD1-215ENST00000470056 TIMM44O43615 452 aa7.09□□□□□ -1.28
GAPVD1-215ENST00000470056 AP2A1O95782 977 aa7.09□□□□□ -1.28
GAPVD1-215ENST00000470056 TUBP50607 506 aa7.09□□□□□ -1.28
GAPVD1-215ENST00000470056 KDSRQ06136 332 aa7.09□□□□□ -1.28
GAPVD1-215ENST00000470056 CYTH1Q15438 398 aa7.09□□□□□ -1.28
GAPVD1-215ENST00000470056 NEK10Q6ZWH5 1172 aa7.09□□□□□ -1.28
GAPVD1-215ENST00000470056 CPNE1Q99829 537 aa7.09□□□□□ -1.28
GAPVD1-215ENST00000470056 EFCAB1Q9HAE3 211 aa7.09□□□□□ -1.28
GAPVD1-215ENST00000470056 NPHS2Q9NP85 383 aa7.09□□□□□ -1.28
GAPVD1-215ENST00000470056 GIMAP4Q9NUV9 329 aa7.09□□□□□ -1.28
GAPVD1-215ENST00000470056 UXTQ9UBK9 157 aaPredicted RBP7.09□□□□□ -1.28
GAPVD1-215ENST00000470056 TEX264Q9Y6I9 313 aa7.09□□□□□ -1.28
GAPVD1-215ENST00000470056 PAGE1O75459 146 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 MAP3K6O95382 1288 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 RHOQP17081 205 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 DRD4P21917 467 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 PPP3CCP48454 512 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 NAA20P61599 178 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 EFEMP1Q12805 493 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 MARK2Q7KZI7 788 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 SPATA17Q96L03 361 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 ZYG11BQ9C0D3 744 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 VPS45Q9NRW7 570 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 TRPM5Q9NZQ8 1165 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 CDYLQ9Y232 598 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 WDR91A4D1P6 747 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 F5H5T6 163 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 KATNA1O75449 491 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 PMLP29590 882 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 ATXN1P54253 815 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 TRIP4Q15650 581 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 RFWD2Q8NHY2 731 aa7.08□□□□□ -1.28
GAPVD1-215ENST00000470056 DEFB118Q96PH6 123 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms