RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 SLC10A4Q96EP9 437 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 TKTL2Q9H0I9 626 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 MRM3Q9HC36 420 aaKnown RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 CDH9Q9ULB4 789 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 AAR2Q9Y312 384 aaKnown RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 SLC4A7Q9Y6M7 1214 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 TRIP12Q14669 1992 aaPredicted RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 GOLGA8QA0A0J9YX86 632 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 GOLGA8OA6NCC3 632 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 GOLGA8NF8WBI6 632 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 AIM2O14862 343 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 PHGDHO43175 533 aaKnown RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 DLX3O60479 287 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 NPHS1O60500 1241 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 PGK1P00558 417 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 IGLV3-25P01717 112 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 CCNCP24863 283 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 ARNTP27540 789 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 EPHA3P29320 983 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 HOXC13P31276 330 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 CYP2C18P33260 490 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 CCR10P46092 362 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 ALDH1A3P47895 512 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 PSEN2P49810 448 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 THOP1P52888 689 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 NAGLUP54802 743 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 CYLC2Q14093 348 aaPredicted RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 ARTNQ5T4W7 220 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 TSTD2Q5T7W7 516 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 ZFP1Q6P2D0 407 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 BEND5Q7L4P6 421 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 OTOP3Q7RTS5 596 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 MFSD6LQ8IWD5 586 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 KDM1BQ8NB78 822 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 PTCD2Q8WV60 388 aaKnown RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 MOCOSQ96EN8 888 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 ZFP42Q96MM3 310 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 IL12RB2Q99665 862 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 CENPKQ9BS16 269 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 EPB41L1Q9H4G0 881 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 ZBTB26Q9HCK0 441 aa13.85□□□□□ -0.19
BRCA1-209ENST00000470026 RUVBL2Q9Y230 463 aaKnown RBP13.85□□□□□ -0.19
BRCA1-209ENST00000470026 GOLGA8TH3BQL2 631 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 HSPA1AP0DMV8 641 aaKnown RBP13.84□□□□□ -0.19
BRCA1-209ENST00000470026 HSPA1BP0DMV9 641 aaKnown RBP13.84□□□□□ -0.19
BRCA1-209ENST00000470026 PDK3Q15120 406 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 CNPY1Q3B7I2 92 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 MMEL1Q495T6 779 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 SH2D4BQ5SQS7 431 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 FBXL19Q6PCT2 694 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 BNC2Q6ZN30 1099 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-209ENST00000470026 PLEKHH3Q7Z736 793 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 CTU1Q7Z7A3 348 aaKnown RBP13.84□□□□□ -0.19
BRCA1-209ENST00000470026 ANKRD23Q86SG2 305 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 TAC4Q86UU9 113 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 ARHGAP12Q8IWW6 846 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 HIPK4Q8NE63 616 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 AGR3Q8TD06 166 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 TSNARE1Q96NA8 513 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 NUF2Q9BZD4 464 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 SLC38A7Q9NVC3 462 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 UBP1Q9NZI7 540 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 RIMS3Q9UJD0 308 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 CDYLQ9Y232 598 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 INPP5FQ9Y2H2 1132 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 ACOT9Q9Y305 439 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 SRGAP2BP0DMP2 458 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 ADRA1AP35348 466 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 GRIA2P42262 883 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 CHN2P52757 468 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 DNAJB13P59910 316 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 RAB10P61026 200 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 FOLH1Q04609 750 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 ARMC3Q5W041 872 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 SLC41A1Q8IVJ1 513 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 RCN3Q96D15 328 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 SMARCD1Q96GM5 515 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 ZNF419Q96HQ0 510 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-209ENST00000470026 HAPLN3Q96S86 360 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 TBL1YQ9BQ87 522 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 ARHGEF38Q9NXL2 777 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 XPR1Q9UBH6 696 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 DTNAQ9Y4J8 743 aa13.84□□□□□ -0.19
BRCA1-209ENST00000470026 NEMP1O14524 444 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 ANXA9O76027 345 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 JUNP05412 331 aaKnown RBP13.83□□□□□ -0.2
BRCA1-209ENST00000470026 XRCC1P18887 633 aaPredicted RBP13.83□□□□□ -0.2
BRCA1-209ENST00000470026 GSTT1P30711 240 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 DPP6P42658 865 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 PSMD8P48556 350 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 CEACAM7Q14002 265 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 ADGRE1Q14246 886 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 R3HDM1Q15032 1099 aaKnown RBP13.83□□□□□ -0.2
BRCA1-209ENST00000470026 POTEHQ6S545 545 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 CEP97Q8IW35 865 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 ICA1LQ8NDH6 482 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 BRI3BPQ8WY22 251 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 EDEM1Q92611 657 aa13.83□□□□□ -0.2
BRCA1-209ENST00000470026 DLG3Q92796 817 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms