RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 SIN3BO75182 1162 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 JCHAINP01591 159 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 HLA-DQB2P05538 268 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 CCNB1P14635 433 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 MMP13P45452 471 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 NRLP54845 237 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 WASHC5Q12768 1159 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 CAMK2GQ13555 558 aaPredicted RBP13.31□□□□□ -0.28
SCAP-210ENST00000468965 HNRNPDQ14103 355 aaKnown RBP13.31□□□□□ -0.28
SCAP-210ENST00000468965 OASLQ15646 514 aaKnown RBP13.31□□□□□ -0.28
SCAP-210ENST00000468965 ATXN7L2Q5T6C5 722 aaPredicted RBP13.31□□□□□ -0.28
SCAP-210ENST00000468965 SYT13Q7L8C5 426 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 METTL3Q86U44 580 aaKnown RBP13.31□□□□□ -0.28
SCAP-210ENST00000468965 CDKL3Q8IVW4 592 aaPredicted RBP13.31□□□□□ -0.28
SCAP-210ENST00000468965 FBXL6Q8N531 539 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 CNTD1Q8N815 330 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 VOPP1Q96AW1 172 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 EXOC2Q96KP1 924 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 IL12RB2Q99665 862 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 AP1M1Q9BXS5 423 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 CEP41Q9BYV8 373 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 USP29Q9HBJ7 922 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 SEPT10Q9P0V9 454 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 SEPT3Q9UH03 358 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 SUN2Q9UH99 717 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 CDC23Q9UJX2 597 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 DOCK9Q9BZ29 2069 aa13.31□□□□□ -0.28
SCAP-210ENST00000468965 TARSL2A2RTX5 802 aaKnown RBP13.3□□□□□ -0.28
SCAP-210ENST00000468965 BNIP3LO60238 219 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 GSRP00390 522 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 CR2P20023 1033 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 PTPN3P26045 913 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 RENBPP51606 427 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 RHOAP61586 193 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 SATB1Q01826 763 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 SNX1Q13596 522 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 BYSLQ13895 437 aaKnown RBP13.3□□□□□ -0.28
SCAP-210ENST00000468965 ZNF235Q14590 738 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 CRY1Q16526 586 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 CCNG2Q16589 344 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 CYP1B1Q16678 543 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 WHAMMP3Q1A5X7 153 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 MARC1Q5VT66 337 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 SDE2Q6IQ49 451 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 DARS2Q6PI48 645 aaKnown RBP13.3□□□□□ -0.28
SCAP-210ENST00000468965 DPY19L3Q6ZPD9 716 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 STK40Q8N2I9 435 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 CHST14Q8NCH0 376 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 OR2A12Q8NGT7 310 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 OR6K2Q8NGY2 324 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 NSMCE1Q8WV22 266 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 HTR3CQ8WXA8 447 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 NKD2Q969F2 451 aaPredicted RBP13.3□□□□□ -0.28
SCAP-210ENST00000468965 NSMCE3Q96MG7 304 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 PSKH2Q96QS6 385 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 FAM129BQ96TA1 746 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 NAP1L3Q99457 506 aaPredicted RBP13.3□□□□□ -0.28
SCAP-210ENST00000468965 MGME1Q9BQP7 344 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 TMEM121Q9BTD3 319 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 IER2Q9BTL4 223 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 CINPQ9BW66 212 aaPredicted RBP13.3□□□□□ -0.28
SCAP-210ENST00000468965 FRMD8P1Q9BZ68 369 aaPredicted RBP13.3□□□□□ -0.28
SCAP-210ENST00000468965 NT5MQ9NPB1 228 aa13.3□□□□□ -0.28
SCAP-210ENST00000468965 RBM22Q9NW64 420 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCAP-210ENST00000468965 TTC24A2A3L6 582 aaPredicted RBP13.29□□□□□ -0.28
SCAP-210ENST00000468965 RNF103O00237 685 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 KRIT1O00522 736 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 RIOK3O14730 519 aaKnown RBP13.29□□□□□ -0.28
SCAP-210ENST00000468965 INSIG1O15503 277 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 GPR37L1O60883 481 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 ATG13O75143 517 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 GJB3O75712 270 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 CTSLP07711 333 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 KCNJ1P48048 391 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 CCNHP51946 323 aaPredicted RBP13.29□□□□□ -0.28
SCAP-210ENST00000468965 COPAP53621 1224 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 GDF10P55107 478 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 MAXP61244 160 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 TEX44Q53QW1 395 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 CARD16Q5EG05 197 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 HEATR6Q6AI08 1181 aaKnown RBP13.29□□□□□ -0.28
SCAP-210ENST00000468965 TTC27Q6P3X3 843 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 DRICH1Q6PGQ1 229 aaPredicted RBP13.29□□□□□ -0.28
SCAP-210ENST00000468965 PLPP6Q8IY26 295 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 C12orf50Q8NA57 414 aaPredicted RBP13.29□□□□□ -0.28
SCAP-210ENST00000468965 OR2AP1Q8NGE2 309 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 HHIPQ96QV1 700 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 SLC8A2Q9UPR5 921 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 ATP8A1Q9Y2Q0 1164 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 SPAG17Q6Q759 2223 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 CEP192Q8TEP8 1941 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 LRRK1Q38SD2 2015 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 FANCMQ8IYD8 2048 aa13.29□□□□□ -0.28
SCAP-210ENST00000468965 K7ESF4 209 aa13.28□□□□□ -0.28
SCAP-210ENST00000468965 KCNN4O15554 427 aa13.28□□□□□ -0.28
SCAP-210ENST00000468965 MTSS1O43312 755 aa13.28□□□□□ -0.28
SCAP-210ENST00000468965 SYNCRIPO60506 623 aaKnown RBP13.28□□□□□ -0.28
SCAP-210ENST00000468965 PHF2O75151 1096 aa13.28□□□□□ -0.28
SCAP-210ENST00000468965 IGSF6O95976 241 aa13.28□□□□□ -0.28
SCAP-210ENST00000468965 AVPR2P30518 371 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms