RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 NME5P56597 212 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CYP4F2P78329 520 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 RUNX1T1Q06455 604 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CYP4F3Q08477 520 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ILF2Q12905 390 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 NFATC3Q12968 1075 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 SELENBP1Q13228 472 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 AP3B2Q13367 1082 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PIN1Q13526 163 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PRKG1Q13976 671 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 SIM2Q14190 667 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CTTNQ14247 550 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TTLL4Q14679 1199 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ACAP2Q15057 778 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CDK10Q15131 360 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 SF3B4Q15427 424 aaKnown RBP eCLIP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 SLC1A5Q15758 541 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 NPTX1Q15818 432 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CYP2A13Q16696 494 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 DGUOKQ16854 277 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CCDC142Q17RM4 750 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TYSND1Q2T9J0 566 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 LETM2Q2VYF4 491 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 C1orf141Q5JVX7 400 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 FAM26FQ5R3K3 315 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 IFIT1BQ5T764 474 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 INTS11Q5TA45 600 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 AGAP9Q5VTM2 703 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 DCAF12L1Q5VU92 463 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 IZUMO3Q5VZ72 239 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 KRT79Q5XKE5 535 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 UGT3A1Q6NUS8 523 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 SHQ1Q6PI26 577 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TTC33Q6PID6 262 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 SEZ6L2Q6UXD5 910 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 KIAA0408Q6ZU52 694 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PIK3AP1Q6ZUJ8 805 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF767PQ75MW2 155 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ATG9AQ7Z3C6 839 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 LIMS2Q7Z4I7 341 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 GALNT7Q86SF2 657 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PRUNE1Q86TP1 453 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CAMK1DQ8IU85 385 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 UNC45BQ8IWX7 931 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 NIM1KQ8IY84 436 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 SAMD14Q8IZD0 417 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF276Q8N554 614 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 LINC00469Q8N7U9 141 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TEX19Q8NA77 164 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 GSTCDQ8NEC7 633 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 OR10Z1Q8NGY1 313 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 UHMK1Q8TAS1 419 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 STK35Q8TDR2 534 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TCP10LQ8TDR4 215 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 BCL7CQ8WUZ0 217 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CAPSLQ8WWF8 208 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PYDC1Q8WXC3 89 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PSPC1Q8WXF1 523 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 SEPT1Q8WYJ6 367 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CD101Q93033 1021 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ARHGEF26Q96DR7 871 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 GIMAP5Q96F15 307 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 FAR2Q96K12 515 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TNIP3Q96KP6 325 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 COG8Q96MW5 612 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 RILPQ96NA2 401 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CRAMP1Q96RY5 1269 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 WRNIP1Q96S55 665 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 STRBPQ96SI9 672 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CIB1Q99828 191 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CNPY3Q9BT09 278 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 NT5C1AQ9BXI3 368 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ANO3Q9BYT9 981 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PUS7LQ9H0K6 701 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 KCNN2Q9H2S1 579 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 GOLPH3Q9H4A6 298 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 EPS8L2Q9H6S3 715 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 DNAJC18Q9H819 358 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ACAD9Q9H845 621 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ZFYVE1Q9HBF4 777 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 IFT122Q9HBG6 1241 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 NEK6Q9HC98 313 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 XAB2Q9HCS7 855 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TM9SF3Q9HD45 589 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ERVK-5Q9HDB9 667 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 MLXIPLQ9NP71 852 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ARHGEF4Q9NR80 690 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 SLC39A1Q9NY26 324 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 MBD2Q9UBB5 411 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ATP6V1HQ9UI12 483 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 RIMS3Q9UJD0 308 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 MAFFQ9ULX9 164 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 VPS4AQ9UN37 437 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 SLC5A6Q9Y289 635 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 GRIP1Q9Y3R0 1128 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CSADQ9Y600 493 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 A3GALT2U3KPV4 340 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 LAMB4A4D0S4 1761 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms