RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 ARID5BQ14865 1188 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 DRAP1Q14919 205 aaPredicted RBP11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 TPD52L1Q16890 204 aaPredicted RBP11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 POM121L1PQ3SYA9 428 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 VWA3BQ502W6 1294 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 MANEAQ5SRI9 462 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 ARTNQ5T4W7 220 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 CAVIN1Q6NZI2 390 aaKnown RBP11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 USP30Q70CQ3 517 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 NOP9Q86U38 636 aaKnown RBP11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 FAM71AQ8IYT1 594 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 ZNF683Q8IZ20 524 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 ATP6V0D2Q8N8Y2 350 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 FRS2Q8WU20 508 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 MIB2Q96AX9 1013 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 SERAC1Q96JX3 654 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 TUBGCP2Q9BSJ2 902 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 NEUROG2Q9H2A3 272 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 ERVMER34-1Q9H9K5 563 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 SAMSN1Q9NSI8 373 aaKnown RBP11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 TAB2Q9NYJ8 693 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 SUN2Q9UH99 717 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 SARDHQ9UL12 918 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 NCKAP1Q9Y2A7 1128 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 PCDHGA4Q9Y5G9 962 aa11.96□□□□□ -0.49
ARHGEF39-202ENST00000468876 A0A1W2PR77 199 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 M0QYT0 321 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 RNF103O00237 685 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 EPHB6O15197 1021 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 MTSS1O43312 755 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 SRPRAP08240 638 aaKnown RBP11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 CKMT1AP12532 417 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 CYP11B1P15538 503 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 SLC8A1P32418 973 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 FLT3P36888 993 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 MLLT3P42568 568 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 SULT1E1P49888 294 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 SLC6A3Q01959 620 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 PTK2Q05397 1052 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 RAB6CQ53S08 254 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 ALFQ53S48 1182 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 EFHC1Q5JVL4 640 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 RABGAP1LQ5R372 815 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 KLHDC7AQ5VTJ3 777 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 RNF219Q5W0B1 726 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 Q6ZVU0 165 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 VASH2Q86V25 355 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 CCDC117Q8IWD4 279 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 KDM1BQ8NB78 822 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 WDR36Q8NI36 951 aaKnown RBP11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 EPS8L1Q8TE68 723 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 SLC20A1Q8WUM9 679 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 RNF34Q969K3 372 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 ARRDC3Q96B67 414 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 GRAMD1AQ96CP6 724 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 FAM81BQ96LP2 452 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 TBCBQ99426 244 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 PSMB7Q99436 277 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 NPY6RQ99463 290 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 FUCA2Q9BTY2 467 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 NAA15Q9BXJ9 866 aaKnown RBP11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 RAB6CQ9H0N0 254 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 SYNCQ9H7C4 482 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 EVA1BQ9NVM1 165 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 ENTPD2Q9Y5L3 495 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 OR51B4Q9Y5P0 310 aa11.95□□□□□ -0.5
ARHGEF39-202ENST00000468876 LRBAP50851 2863 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 F8VZ95 297 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 SNAP91O60641 907 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 MOCS3O95396 460 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 IL1BP01584 269 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 GP1BAP07359 652 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 ITGA2BP08514 1039 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 SLC5A2P31639 672 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 CDH5P33151 784 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 KRT9P35527 623 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 RNASE9P60153 205 aaKnown RBP11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 ELAVL3Q14576 367 aaKnown RBP11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 TTC39BQ5VTQ0 682 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 XYLT1Q86Y38 959 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 ZNF397Q8NF99 534 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 OR4C6Q8NH72 309 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 NOX5Q96PH1 765 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 SIK2Q9H0K1 926 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 GANQ9H2C0 597 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 KDM4CQ9H3R0 1056 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 CAAP1Q9H8G2 361 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 ZNF71Q9NQZ8 489 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 ARHGEF38Q9NXL2 777 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 SEPT10Q9P0V9 454 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 FZD4Q9ULV1 537 aa11.94□□□□□ -0.5
ARHGEF39-202ENST00000468876 SETD2Q9BYW2 2564 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF39-202ENST00000468876 ZFC3H1O60293 1989 aaKnown RBP11.93□□□□□ -0.5
ARHGEF39-202ENST00000468876 TARSL2A2RTX5 802 aaKnown RBP11.93□□□□□ -0.5
ARHGEF39-202ENST00000468876 LRRC72A6NJI9 287 aa11.93□□□□□ -0.5
ARHGEF39-202ENST00000468876 GOLGA8SH3BPF8 625 aa11.93□□□□□ -0.5
ARHGEF39-202ENST00000468876 K7ERQ8 282 aa11.93□□□□□ -0.5
ARHGEF39-202ENST00000468876 PES1O00541 588 aaKnown RBP11.93□□□□□ -0.5
ARHGEF39-202ENST00000468876 NOBOXO60393 691 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms